ENSDARG00000099980


Danio rerio

Features
Gene ID: ENSDARG00000099980
  
Biological name :bpifcl
  
Synonyms : bpifcl / BPI fold containing family C, like
  
Possible biological names infered from orthology : BPIFC / BPI fold containing family C / Q8NFQ6
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 343062
Gene end: 353894
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130672
Ensembl peptide - ENSDARP00000139184
Ensembl peptide - ENSDARP00000135594
NCBI entrez gene - 100003132     See in Manteia.
RefSeq - XM_001342726
swissprot - A0A0R4IR32
swissprot - A0A0R4IPC9
swissprot - A0A0R4IDF9
ZFIN ID - ZDB-GENE-070912-360
Ensembl - ENSDARG00000099980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039479Gallus gallus
 ENSGALG00000045260Gallus gallus
 BPIFCENSG00000184459Homo sapiens
 BpifcENSMUSG00000050108Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pltp / phospholipid transfer protein / P55058* / P55065*ENSDARG0000010449519


Protein motifs (from Interpro)
Interpro ID Name
 IPR001124  Lipid-binding serum glycoprotein, C-terminal
 IPR017942  Lipid-binding serum glycoprotein, N-terminal
 IPR017943  Bactericidal permeability-increasing protein, alpha/beta domain superfamily
 IPR030181  Bactericidal permeability-increasing protein
 IPR030675  Lipid binding protein BPI/LBP
 IPR032942  BPI/LBP/Plunc family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0050829 defense response to Gram-negative bacterium IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0001530 lipopolysaccharide binding IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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