ENSDARG00000100467


Danio rerio

Features
Gene ID: ENSDARG00000100467
  
Biological name :fkrp
  
Synonyms : fkrp / fukutin related protein
  
Possible biological names infered from orthology : Mus musculus fukutin related protein (Fkrp), transcript variant 2, mRNA. / Q8CG64 / Q9H9S5
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 11679759
Gene end: 11683529
  
Corresponding Affymetrix probe sets: Dr.11951.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133750
Ensembl peptide - ENSDARP00000147916
NCBI entrez gene - 571426     See in Manteia.
RefSeq - NM_001089490
RefSeq - NM_001042689
RefSeq Peptide - NP_001036154
RefSeq Peptide - NP_001082959
swissprot - Q0PIP5
ZFIN ID - ZDB-GENE-070412-4
Ensembl - ENSDARG00000100467
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FKRPENSG00000181027Homo sapiens
 FkrpENSMUSG00000048920Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007074  LicD family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001570 vasculogenesis IMP
 biological_processGO:0014706 striated muscle tissue development IMP
 biological_processGO:0030198 extracellular matrix organization IMP
 biological_processGO:0048747 muscle fiber development IMP
 biological_processGO:0060049 regulation of protein glycosylation IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
brain morphology , abnormal
Show

 ZFA:0000014 dorsal aorta dorsal aorta intersegmental vessel separated from dorsal longitudinal anastomotic vessel , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , abnormal
Show

 ZFA:0000046 retinal neural layer retinal neural layer disorganized , abnormal
Show

 ZFA:0000054 pericardium pericardium increased size , abnormal
Show

 ZFA:0000107 eye eye morphology , abnormal
eye decreased diameter , abnormal
eye decreased size , abnormal
Show

 ZFA:0000135 notochord notochord disorganized , abnormal
notochord nucleus morphology , abnormal
notochord vacuole decreased size , abnormal
notochord endoplasmic reticulum increased size , abnormal
notochord Golgi apparatus morphology , abnormal
Show

 ZFA:0000155 somite somite morphology , abnormal
somite myofibril unstructured , abnormal
somite myoseptum deformed , abnormal
somite intersegmental vessel absent , abnormal
somite intersegmental vessel disorganized , abnormal
Show

 ZFA:0000610 vertical myoseptum vertical myoseptum morphology , abnormal
vertical myoseptum curved , abnormal
Show

 ZFA:0000671 horizontal myoseptum horizontal myoseptum aplastic , abnormal
Show

 ZFA:0001056 myotome myotome decreased mass , abnormal
myotome basement membrane morphology , abnormal
myotome myofibril refractivity , abnormal
myotome myofibril spatial pattern , abnormal
myotome myofibril decreased length , abnormal
Show

 ZFA:0001089 myoseptum myoseptum disorganized , abnormal
myoseptum increased distance myoseptum , abnormal
Show

 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
whole organism mobility , abnormal
whole organism immobile , abnormal
whole organism laminin binding decreased occurrence , abnormal
whole organism dead , abnormal
Show

 ZFA:0001114 head head morphology , abnormal
Show

 ZFA:0001115 trunk trunk contractile fiber disorganized , abnormal
Show

 ZFA:0001117 post-vent region post-vent region bent , abnormal
post-vent region curved ventral , abnormal
post-vent region movement quality , abnormal
post-vent region decreased length , abnormal
Show

 ZFA:0001135 neural tube neural tube disorganized , abnormal
Show

 ZFA:0001462 somite border somite border U-shaped , abnormal
Show

 ZFA:0005054 inner optic circle inner optic circle blood vessel decreased size , abnormal
inner optic circle blood vessel elliptic , abnormal
Show

 ZFA:0005145 muscle muscle disorganized , abnormal
Show

 ZFA:0007057 ocular blood vessel ocular blood vessel deformed , abnormal
ocular blood vessel decreased size , abnormal
Show

 ZFA:0009114 muscle cell muscle cell irregular spatial pattern , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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