ENSDARG00000100892


Danio rerio

Features
Gene ID: ENSDARG00000100892
  
Biological name :cfap53
  
Synonyms : A0A0R4IFG5 / cfap53 / cilia and flagella associated protein 53
  
Possible biological names infered from orthology : Q96M91 / Q9D439
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 22549720
Gene end: 22557469
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134066
NCBI entrez gene - 567344     See in Manteia.
RefSeq - NM_001045130
RefSeq Peptide - NP_001038595
swissprot - A0A0R4IFG5
ZFIN ID - ZDB-GENE-060503-508
Ensembl - ENSDARG00000100892
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CFAP53ENSG00000172361Homo sapiens
 Cfap53ENSMUSG00000035394Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033365  Cilia- and flagella-associated protein 53


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003341 cilium movement IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0060287 epithelial cilium movement involved in determination of left/right asymmetry IMP
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0097546 ciliary base IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle motile cilium immobile , abnormal
Kupffers vesicle outer dynein arm decreased amount , abnormal
Kupffers vesicle epithelial cilium movement involved in determination of left/right asymmetry decreased process quality , abnormal
Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
Show

 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000075 spinal cord spinal cord motile cilium immobile , abnormal
Show

 ZFA:0000112 gut gut determination of digestive tract left/right asymmetry decreased process quality , abnormal
Show

 ZFA:0000114 heart heart heart looping decreased process quality , abnormal
Show

 ZFA:0000115 heart rudiment heart rudiment right side mislocalised , abnormal
heart rudiment determination of heart left/right asymmetry decreased process quality , abnormal
Show

 ZFA:0000121 lateral plate mesoderm lateral plate mesoderm right side mislocalised , abnormal
lateral plate mesoderm determination of left/right asymmetry in lateral mesoderm decreased process quality , abnormal
lateral plate mesoderm spatial pattern , abnormal
Show

 ZFA:0000151 pronephros pronephros cilium decreased length , abnormal
pronephros cilium decreased amount , abnormal
Show

 ZFA:0000213 habenula habenula right side mislocalised , abnormal
habenula determination of left/right asymmetry in diencephalon decreased process quality , abnormal
Show

 ZFA:0000360 heart tube heart tube heart jogging decreased process quality , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001617 otolith otolith morphology , abnormal
Show

 ZFA:0005042 posterior lateral plate mesoderm posterior lateral plate mesoderm right side mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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