ENSDARG00000101794


Danio rerio

Features
Gene ID: ENSDARG00000101794
  
Biological name :rpl26
  
Synonyms : atp6v0e1 / ribosomal protein L26 / rpl26
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 52565660
Gene end: 52576034
  
Corresponding Affymetrix probe sets: Dr.25291.5.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132755
Ensembl peptide - ENSDARP00000149688
NCBI entrez gene - 450017     See in Manteia.
NCBI entrez gene - 406387     See in Manteia.
RefSeq - NM_001006038
RefSeq Peptide - NP_001006038
swissprot - F1Q700
ZFIN ID - ZDB-GENE-040426-2117
ZFIN ID - ZDB-GENE-041010-133
Ensembl - ENSDARG00000101794
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atpv0e2 / ATPase H+ transporting V0 subunit e2 / Q8NHE4* / Q91XE7* / ATP6V0E2* / Mus musculus ATPase, H+ transporting, lysosomal V0 subunit E2 (Atp6v0e2), transcript variant 2, mRNA.*ENSDARG0000005905764


Protein motifs (from Interpro)
Interpro ID Name
 IPR005756  Ribosomal protein L26/L24, eukaryotic/archaeal
 IPR005824  KOW
 IPR005825  Ribosomal protein L24/L26, conserved site
 IPR008389  ATPase, V0 complex, subunit e1/e2
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2
 IPR017385  ATPase, V0 complex, subunit e1/e2, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033179 proton-transporting V-type ATPase, V0 domain IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046961 proton-transporting ATPase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder structure, cavities , ameliorated
swim bladder uninflated , abnormal
Show

 ZFA:0000107 eye eye increased amount , abnormal
Show

 ZFA:0000114 heart heart composition , ameliorated
heart edematous , abnormal
Show

 ZFA:0000144 retinal pigmented epithelium retinal pigmented epithelium has extra parts of type retinal pigmented epithelium inclusion body, abnormal
retinal pigmented epithelium decreased pigmentation , abnormal
Show

 ZFA:0001094 whole organism whole organism increased amount , abnormal
Show

 ZFA:0001289 ciliary marginal zone ciliary marginal zone apoptotic process occurrence , ameliorated
ciliary marginal zone apoptotic process increased occurrence , abnormal
ciliary marginal zone apoptotic chromosome condensation occurrence , ameliorated
ciliary marginal zone apoptotic chromosome condensation increased occurrence , abnormal
ciliary marginal zone cell apoptotic , abnormal
Show

 ZFA:0009127 photoreceptor cell photoreceptor cell morphology , abnormal
photoreceptor cell morphology , ameliorated
Show

 ZFA:0009262 retinal cone cell retinal cone cell photoreceptor outer segment decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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