ENSDARG00000102175


Danio rerio

Features
Gene ID: ENSDARG00000102175
  
Biological name :hamp
  
Synonyms : hamp / hepcidin antimicrobial peptide / Q7T273
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 50289916
Gene end: 50292583
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130038
Ensembl peptide - ENSDARP00000131567
NCBI entrez gene - 402837     See in Manteia.
RefSeq - NM_205583
RefSeq - NM_001289794
RefSeq Peptide - NP_001276723
RefSeq Peptide - NP_991146
swissprot - Q7T273
ZFIN ID - ZDB-GENE-050726-1
Ensembl - ENSDARG00000102175
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010500  Hepcidin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006879 cellular iron ion homeostasis IEA
 biological_processGO:0009617 response to bacterium IDA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0042742 defense response to bacterium IEA
 biological_processGO:0050829 defense response to Gram-negative bacterium IDA
 biological_processGO:0050830 defense response to Gram-positive bacterium IDA
 biological_processGO:0055072 iron ion homeostasis IMP
 biological_processGO:0071383 cellular response to steroid hormone stimulus IMP
 biological_processGO:0071393 cellular response to progesterone stimulus IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0001530 lipopolysaccharide binding IDA
 molecular_functionGO:0005179 hormone activity IEA
 molecular_functionGO:0042834 peptidoglycan binding IDA
 molecular_functionGO:0070891 lipoteichoic acid binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure decreased amount , abnormal
Show

 ZFA:0000250 opercle opercle bone mineralization decreased occurrence , abnormal
Show

 ZFA:0001058 caudal fin caudal fin bone mineralization decreased occurrence , abnormal
Show

 ZFA:0001114 head head decreased amount , abnormal
Show

 ZFA:0001189 vertebra vertebra bone mineralization decreased occurrence , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr