ENSDARG00000102215


Danio rerio

Features
Gene ID: ENSDARG00000102215
  
Biological name :si:ch211-227e10.6
  
Synonyms : si:ch211-227e10.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 54480250
Gene end: 54504217
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147294
Ensembl peptide - ENSDARP00000141435
Ensembl peptide - ENSDARP00000135299
NCBI entrez gene - 100008037     See in Manteia.
NCBI entrez gene - 100034459     See in Manteia.
NCBI entrez gene - 110439520     See in Manteia.
RefSeq - XM_021475597
RefSeq - NM_001083060
RefSeq - NM_001128300
RefSeq Peptide - NP_001121772
RefSeq Peptide - NP_001076529
swissprot - A0A0R4IXT2
swissprot - A0A0R4IA50
ZFIN ID - ZDB-GENE-050420-355
Ensembl - ENSDARG00000102215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-232d10.3ENSDARG0000010400892
si:ch211-205a14.7ENSDARG0000010222592
si:dkey-29j8.1ENSDARG0000010127292
si:dkey-71l4.4ENSDARG0000010491692
si:dkey-27n6.4ENSDARG0000010175791
si:dkey-269p2.1ENSDARG0000009527591
si:dkey-3h2.3 / si:dkeyp-4f2.1ENSDARG0000010261691
si:ch211-276i6.1ENSDARG0000011343190
si:ch211-76m11.8ENSDARG0000009830590
si:dkey-82i20.1 / si:ch211-76m11.3ENSDARG0000010489090
si:dkey-156k2.4 / si:dkey-261o4.6ENSDARG0000010292790
si:ch211-218h8.1ENSDARG0000009102690
si:ch211-208f21.3ENSDARG0000007722089
si:ch211-129p6.2 / si:ch211-76m11.8ENSDARG0000009839089
si:dkey-159n16.2ENSDARG0000011457789
zgc:110171 / si:dkey-240n22.3ENSDARG0000010165389
si:ch211-237a4.2 / si:ch211-79g12.2ENSDARG0000010011088
si:dkey-211i20.2 / si:dkey-254e13.6ENSDARG0000008830188
si:dkey-51d8.1 / si:dkey-29p23.1ENSDARG0000008985288
si:dkey-240n22.6ENSDARG0000008929688


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr