ENSDARG00000102299


Danio rerio

Features
Gene ID: ENSDARG00000102299
  
Biological name :cxcl8b.1
  
Synonyms : chemokine (C-X-C motif) ligand 8b, duplicate 1 / cxcl8b.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 7839612
Gene end: 7845540
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131403
NCBI entrez gene - 100536594     See in Manteia.
RefSeq - NM_001327985
RefSeq Peptide - NP_001314914
swissprot - N0GW19
ZFIN ID - ZDB-GENE-101026-3
Ensembl - ENSDARG00000102299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01030278.1ENSDARG0000011060145
cxcl8b.3 / chemokine (C-X-C motif) ligand 8b, duplicate 3ENSDARG0000009916930


Protein motifs (from Interpro)
Interpro ID Name
 IPR001089  CXC chemokine
 IPR001811  Chemokine interleukin-8-like domain
 IPR028469  Interleukin-8
 IPR033899  CXC Chemokine domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002523 leukocyte migration involved in inflammatory response IMP
 biological_processGO:0002690 positive regulation of leukocyte chemotaxis IBA
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0006952 defense response IEA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0009611 response to wounding IMP
 biological_processGO:0009617 response to bacterium IMP
 biological_processGO:0030593 neutrophil chemotaxis IMP
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 biological_processGO:1990266 neutrophil migration IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0008009 chemokine activity IBA
 molecular_functionGO:0045236 CXCR chemokine receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000007 blood blood neutrophil decreased amount , abnormal
Show

 ZFA:0001058 caudal fin caudal fin decreased amount , abnormal
caudal fin neutrophil decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased life span , exacerbated
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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