ENSDARG00000102746


Danio rerio

Features
Gene ID: ENSDARG00000102746
  
Biological name :tmem39a
  
Synonyms : tmem39a / transmembrane protein 39A
  
Possible biological names infered from orthology : Q9CYC3 / Q9NV64
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 39313
Gene end: 44565
  
Corresponding Affymetrix probe sets: Dr.21191.1.A1_at (Zebrafish Array)   NM_199632_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130474
Ensembl peptide - ENSDARP00000142019
Ensembl peptide - ENSDARP00000139614
Ensembl peptide - ENSDARP00000138450
Ensembl peptide - ENSDARP00000137064
Ensembl peptide - ENSDARP00000135294
NCBI entrez gene - 323208     See in Manteia.
RefSeq - NM_199632
RefSeq Peptide - NP_955926
swissprot - A0A0R4IMS5
swissprot - A0A0R4IJA5
swissprot - A0A0J9YJ27
swissprot - F1QZE4
swissprot - A0A0R4IZH5
swissprot - A0A0R4IU30
ZFIN ID - ZDB-GENE-030131-1928
Ensembl - ENSDARG00000102746
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM39AENSGALG00000015073Gallus gallus
 Q9NV64ENSG00000176142Homo sapiens
 Q9CYC3ENSMUSG00000002845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7ZW11 / tmem39b / transmembrane protein 39B / Q810L4* / Q9GZU3* / Mus musculus transmembrane protein 39b (Tmem39b), transcript variant 2, mRNA.*ENSDARG0000001895651


Protein motifs (from Interpro)
Interpro ID Name
 IPR019397  Uncharacterised protein family TMEM39


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr