ENSDARG00000102992


Danio rerio

Features
Gene ID: ENSDARG00000102992
  
Biological name :btr20
  
Synonyms : bloodthirsty-related gene family, member 20 / btr20
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 3762885
Gene end: 3773905
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137833
NCBI entrez gene - 678596     See in Manteia.
RefSeq - XM_003200513
swissprot - A0A0R4IUT0
ZFIN ID - ZDB-GENE-060421-3419
Ensembl - ENSDARG00000102992
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bty / btr25 / bloodthirsty-related gene family, member 25ENSDARG0000010201883
btr22 / bloodthirsty-related gene family, member 22ENSDARG0000010053982
zgc:173581ENSDARG0000010090981
btr18 / bloodthirsty-related gene family, member 18ENSDARG0000010361880
btr26 / bloodthirsty-related gene family, member 26ENSDARG0000010524179
btr24 / bloodthirsty-related gene family, member 24ENSDARG0000010214379
btr21 / bloodthirsty-related gene family, member 21ENSDARG0000010045075
btr19 / btr24 / bloodthirsty-related gene family, member 19ENSDARG0000010528372
btr23 / bloodthirsty-related gene family, member 23ENSDARG0000009950968
btr06 / bloodthirsty-related gene family, member 6ENSDARG0000005418466
btr07 / bloodthirsty-related gene family, member 7ENSDARG0000010555862
btr21 / si:ch211-247l8.10 / bloodthirsty-related gene family, member 21ENSDARG0000005832962
btr04 / si:ch211-247l8.8ENSDARG0000009511361
btr32 / bloodthirsty-related gene family, member 32ENSDARG0000005394058
btr29 / bloodthirsty-related gene family, member 29ENSDARG0000009913857
btr05 / bloodthirsty-related gene family, member 5ENSDARG0000007481355
si:ch211-216p19.6ENSDARG0000002790755
btr04 / bloodthirsty-related gene family, member 4ENSDARG0000006096250
btr09 / bloodthirsty-related gene family, member 9ENSDARG0000005480549
btr16 / bloodthirsty-related gene family, member 16ENSDARG0000002885047


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003613  U box domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr