ENSDARG00000103498


Danio rerio

Features
Gene ID: ENSDARG00000103498
  
Biological name :epd
  
Synonyms : epd / ependymin / P17561
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 37837245
Gene end: 37839310
  
Corresponding Affymetrix probe sets: Dr.268.1.S1_at (Zebrafish Array)   NM_131005_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134034
NCBI entrez gene - 30199     See in Manteia.
RefSeq - NM_131005
RefSeq Peptide - NP_571080
swissprot - P17561
ZFIN ID - ZDB-GENE-980526-111
Ensembl - ENSDARG00000103498
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
epdl2 / ependymin-like 2ENSDARG0000005553929
epdl1 / ependymin-like 1ENSDARG0000007638628
epdr1 / ependymin related 1 / Q99M71* / Q9UM22* / Mammalian ependymin-related protein 1 *ENSDARG0000004542019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001299  Ependymin
 IPR018224  Ependymin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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