ENSDARG00000103545


Danio rerio

Features
Gene ID: ENSDARG00000103545
  
Biological name :tctex1d1
  
Synonyms : Q66IC8 / tctex1d1 / Tctex1 domain containing 1
  
Possible biological names infered from orthology : Q8N7M0 / Q9D5I4
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 14207559
Gene end: 14272083
  
Corresponding Affymetrix probe sets: Dr.18553.1.S1_at (Zebrafish Array)   NM_001004623_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133488
Ensembl peptide - ENSDARP00000146267
NCBI entrez gene - 447884     See in Manteia.
RefSeq - NM_001004623
RefSeq Peptide - NP_001004623
swissprot - Q66IC8
ZFIN ID - ZDB-GENE-040912-49
Ensembl - ENSDARG00000103545
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8N7M0ENSG00000152760Homo sapiens
 Q9D5I4ENSMUSG00000028523Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tctex1d2 / Tctex1 domain containing 2 / Q8WW35* / Q9CQ66* / AC069257.3*ENSDARG0000005425520


Protein motifs (from Interpro)
Interpro ID Name
 IPR005334  Tctex-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000047 peripheral olfactory organ peripheral olfactory organ cilium morphology , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
Show

 ZFA:0001617 otolith otolith malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr