ENSDARG00000104448


Danio rerio

Features
Gene ID: ENSDARG00000104448
  
Biological name :zgc:77287
  
Synonyms : zgc:77287
  
Possible biological names infered from orthology : leucine rich repeat protein 1 / LRR1 / Q96L50
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 132555
Gene end: 139594
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130485
swissprot - A0A0G2KDW9
ZFIN ID - ZDB-GENE-040426-2337
Ensembl - ENSDARG00000104448
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRR1ENSGALG00000012230Gallus gallus
 LRR1ENSG00000165501Homo sapiens
 Lrr1ENSMUSG00000034883Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrc58b / leucine rich repeat containing 58b / Q96CX6* / LRRC58* / Q3UGP9* / leucine rich repeat containing 58* / Leucine-rich repeat-containing protein 58 *ENSDARG0000006350924
lrrc58a / leucine rich repeat containing 58a / Q96CX6* / LRRC58* / Q3UGP9* / leucine rich repeat containing 58* / Leucine-rich repeat-containing protein 58 *ENSDARG0000007677324


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr