ENSDARG00000104596


Danio rerio

Features
Gene ID: ENSDARG00000104596
  
Biological name :gtf2a1l
  
Synonyms : general transcription factor IIA, 1-like / gtf2a1l
  
Possible biological names infered from orthology : Q8CDJ8 / Q9Y6Q2 / STON1 / STON1-GTF2A1L / STON1-GTF2A1L readthrough / stonin 1
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 40508
Gene end: 44423
  
Corresponding Affymetrix probe sets: Dr.14938.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000087679
NCBI entrez gene - 100334703     See in Manteia.
RefSeq - NM_001327971
RefSeq Peptide - NP_001314900
swissprot - F1R8F7
ZFIN ID - ZDB-GENE-060929-28
Ensembl - ENSDARG00000104596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STON1ENSGALG00000009092Gallus gallus
 STON1ENSG00000243244Homo sapiens
 STON1-GTF2A1LENSG00000068781Homo sapiens
 Ston1ENSMUSG00000033855Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ston2 / stonin 2 / Q8BZ60* / Q8WXE9*ENSDARG0000005745227


Protein motifs (from Interpro)
Interpro ID Name
 IPR012320  Stonin homology
 IPR028565  Mu homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005672 transcription factor TFIIA complex IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003713 transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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