ENSDARG00000105018


Danio rerio

Features
Gene ID: ENSDARG00000105018
  
Biological name :lrrc20
  
Synonyms : leucine rich repeat containing 20 / lrrc20
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 20 / Q8CI70 / Q8TCA0
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 48216662
Gene end: 48240513
  
Corresponding Affymetrix probe sets: Dr.14868.1.S1_at (Zebrafish Array)   NM_001007357_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000150301
Ensembl peptide - ENSDARP00000136255
NCBI entrez gene - 492485     See in Manteia.
RefSeq - NM_001007357
RefSeq - XM_021480056
RefSeq Peptide - NP_001007358
swissprot - A0A0R4IPB8
ZFIN ID - ZDB-GENE-041114-49
Ensembl - ENSDARG00000105018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC20ENSGALG00000030964Gallus gallus
 LRRC20ENSG00000172731Homo sapiens
 Lrrc20ENSMUSG00000037151Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr