ENSDARG00000105046


Danio rerio

Features
Gene ID: ENSDARG00000105046
  
Biological name :ccnf
  
Synonyms : ccnf / cyclin F / Q6NYX6
  
Possible biological names infered from orthology : P41002 / P51944
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 12554801
Gene end: 12586613
  
Corresponding Affymetrix probe sets: Dr.455.1.A1_at (Zebrafish Array)   NM_207048_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000141877
NCBI entrez gene - 266981     See in Manteia.
RefSeq - NM_207048
RefSeq Peptide - NP_996931
swissprot - Q6NYX6
ZFIN ID - ZDB-GENE-021030-2
Ensembl - ENSDARG00000105046
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCNFENSGALG00000038502Gallus gallus
 CCNFENSG00000162063Homo sapiens
 CcnfENSMUSG00000072082Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR028857  Cyclin-F, metazoan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010826 negative regulation of centrosome duplication ISS
 biological_processGO:0016567 protein ubiquitination ISS
 biological_processGO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISS
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005814 centriole ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0019005 SCF ubiquitin ligase complex ISS


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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