ENSDARG00000105056


Danio rerio

Features
Gene ID: ENSDARG00000105056
  
Biological name :znf45l
  
Synonyms : zinc finger 45 like / znf45l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 1352192
Gene end: 1361148
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139911
NCBI entrez gene - 541369     See in Manteia.
RefSeq - NM_001013496
RefSeq Peptide - NP_001013514
swissprot - A0A0R4IW81
ZFIN ID - ZDB-GENE-050320-63
Ensembl - ENSDARG00000105056
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-111k8.5ENSDARG0000009752162
FO704858.1ENSDARG0000009167961
zgc:113443 / zgc:173517ENSDARG0000010080357
zgc:113886ENSDARG0000007771255
si:ch211-235i11.5ENSDARG0000009337850
zgc:113102ENSDARG0000011301149
BX000701.1ENSDARG0000009917249
si:ch211-235i11.6ENSDARG0000009783947
BX322657.3ENSDARG0000011336546
BX000701.2ENSDARG0000010507445
CR847850.1ENSDARG0000010241145
CU207221.2ENSDARG0000009989045
si:ch211-235i11.4ENSDARG0000008829845
FO834825.1ENSDARG0000010970344
zgc:113102ENSDARG0000010353040
znf1001 / zinc finger protein 1001ENSDARG0000010377740
zgc:173577ENSDARG0000009892340
CU896630.1ENSDARG0000010088338
znf1001 / zinc finger protein 1001ENSDARG0000010240137
znf1001 / zinc finger protein 1001ENSDARG0000011585737


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism anterior region necrotic , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved ventral , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr