ENSDARG00000105117


Danio rerio

Features
Gene ID: ENSDARG00000105117
  
Biological name :sdad1
  
Synonyms : SDA1 domain containing 1 / sdad1
  
Possible biological names infered from orthology : Q9NVU7
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 9366967
Gene end: 9384374
  
Corresponding Affymetrix probe sets: Dr.1204.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000140551
Ensembl peptide - ENSDARP00000142023
NCBI entrez gene - 286746     See in Manteia.
RefSeq - NM_173230
RefSeq Peptide - NP_775337
swissprot - A0A0R4IYN8
swissprot - A0A0R4IW28
ZFIN ID - ZDB-GENE-021213-1
Ensembl - ENSDARG00000105117
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDAD1ENSGALG00000011543Gallus gallus
 SDAD1ENSG00000198301Homo sapiens
 Sdad1ENSMUSG00000029415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007949  SDA1 domain
 IPR011989  Armadillo-like helical
 IPR012977  Uncharacterised domain NUC130/133, N-terminal
 IPR016024  Armadillo-type fold
 IPR027312  Sda1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
Show

 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton aplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr