ENSDARG00000110271


Danio rerio

Features
Gene ID: ENSDARG00000110271
  
Biological name :RF00003
  
Synonyms : RF00003
  
Possible biological names infered from orthology : Gm22042 / Gm22614 / Gm24136 / Gm24405 / Gm24621 / Gm24830 / Gm25890 / Gm26110 / Gm26232 / predicted gene, 22042 / predicted gene, 22614 / predicted gene, 24136 / predicted gene, 24405 / predicted gene, 24621 / predicted gene, 24830 / predicted gene, 25890 / predicted gene, 26110 / predicted gene, 26232 / Rnu1b1 / Rnu1b2 / Rnu1b6 / U1b1 small nuclear RNA / U1b2 small nuclear RNA / U1b6 small nuclear RNA
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 41360684
Gene end: 41360847
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSDARG00000110271
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RF00003ENSGALG00000040762Gallus gallus
 RF00003ENSGALG00000026158Gallus gallus
 RF00003ENSGALG00000031011Gallus gallus
 RF00003ENSGALG00000028766Gallus gallus
 RF00003ENSGALG00000029087Gallus gallus
 RF00003ENSGALG00000017933Gallus gallus
 RF00003ENSGALG00000026932Gallus gallus
 RF00003ENSGALG00000043168Gallus gallus
 RF00003ENSGALG00000028202Gallus gallus
 RF00003ENSGALG00000040081Gallus gallus
 RF00003ENSGALG00000032062Gallus gallus
 Gm22042ENSMUSG00000064923Mus musculus
 Gm22614ENSMUSG00000094812Mus musculus
 Gm24136ENSMUSG00000095513Mus musculus
 Gm24405ENSMUSG00000064967Mus musculus
 Gm24621ENSMUSG00000064613Mus musculus
 Gm24830ENSMUSG00000095701Mus musculus
 Gm25890ENSMUSG00000095260Mus musculus
 Gm26110ENSMUSG00000065905Mus musculus
 Gm26232ENSMUSG00000096838Mus musculus
 Rnu1b1ENSMUSG00000095580Mus musculus
 Rnu1b2ENSMUSG00000093834Mus musculus
 Rnu1b6ENSMUSG00000065773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00003ENSDARG00000115808100
RF00003ENSDARG00000114972100
RF00003ENSDARG00000113020100
RF00003ENSDARG00000110989100
RF00003ENSDARG00000109530100
RF00003ENSDARG00000111764100
RF00003ENSDARG00000117047100
RF00003ENSDARG00000112166100
RF00003ENSDARG00000114078100
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSDARG00000109896100
RF00003ENSDARG00000116390100
RF00003ENSDARG00000116234100
RF00003ENSDARG00000082646100
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSDARG00000111563100
RF00003ENSDARG00000112345100
RF00003ENSDARG0000009155299
RF00003ENSDARG0000011594499
RF00003ENSDARG0000011455799
RF00003ENSDARG0000011333599
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSDARG0000011720699


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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