ENSDARG00000112234


Danio rerio

Features
Gene ID: ENSDARG00000112234
  
Biological name :endouc
  
Synonyms : endonuclease, polyU-specific C / endouc / Q1LUM3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 15459318
Gene end: 15467446
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000154618
NCBI entrez gene - 562040     See in Manteia.
RefSeq - NM_001044974
RefSeq Peptide - NP_001038439
swissprot - Q1LUM3
ZFIN ID - ZDB-GENE-060503-141
Ensembl - ENSDARG00000112234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014126Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-222f8.3ENSDARG0000005836661
endou2 / endonuclease, polyU-specific 2ENSDARG0000002012242
endou / endonuclease, polyU-specific / P21128* / Q3V188* / endonuclease, poly(U) specific* / Poly(U)-specific endoribonuclease *ENSDARG0000004420428


Protein motifs (from Interpro)
Interpro ID Name
 IPR018998  EndoU ribonuclease family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0003723 RNA binding ISS
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004521 endoribonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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