ENSG00000010539


Homo sapiens

Features
Gene ID: ENSG00000010539
  
Biological name :ZNF200
  
Synonyms : P98182 / zinc finger protein 200 / ZNF200
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 3222325
Gene end: 3236221
  
Corresponding Affymetrix probe sets: 207338_s_at (Human Genome U133 Plus 2.0 Array)   214706_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458777
Ensembl peptide - ENSP00000405786
Ensembl peptide - ENSP00000458508
Ensembl peptide - ENSP00000380077
Ensembl peptide - ENSP00000380079
Ensembl peptide - ENSP00000380080
Ensembl peptide - ENSP00000395723
NCBI entrez gene - 7752     See in Manteia.
OMIM - 603231
RefSeq - XM_017023647
RefSeq - NM_001145446
RefSeq - NM_001145447
RefSeq - NM_001145448
RefSeq - NM_003454
RefSeq - NM_198087
RefSeq - NM_198088
RefSeq - XM_005255556
RefSeq - XM_006720940
RefSeq - XM_006720941
RefSeq Peptide - NP_003445
RefSeq Peptide - NP_932353
RefSeq Peptide - NP_932354
RefSeq Peptide - NP_001138919
RefSeq Peptide - NP_001138920
RefSeq Peptide - NP_001138918
swissprot - P98182
swissprot - I3L1E4
Ensembl - ENSG00000010539
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96LX8 / ZNF597 / zinc finger protein 597ENSG0000016798128


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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