ENSG00000033011


Homo sapiens

Features
Gene ID: ENSG00000033011
  
Biological name :ALG1
  
Synonyms : ALG1 / ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase / Q9BT22
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 5033960
Gene end: 5087379
  
Corresponding Affymetrix probe sets: 223355_at (Human Genome U133 Plus 2.0 Array)   236626_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468118
Ensembl peptide - ENSP00000467538
Ensembl peptide - ENSP00000467865
Ensembl peptide - ENSP00000262374
Ensembl peptide - ENSP00000440019
Ensembl peptide - ENSP00000464700
NCBI entrez gene - 56052     See in Manteia.
OMIM - 605907
RefSeq - XM_017023458
RefSeq - NM_019109
RefSeq - XM_011522565
RefSeq - XM_017023457
RefSeq Peptide - NP_001317433
RefSeq Peptide - NP_061982
swissprot - Q9BT22
swissprot - K7EPU3
swissprot - K7EQK1
swissprot - K7EID2
Ensembl - ENSG00000033011
  
Related genetic diseases (OMIM): 608540 - Congenital disorder of glycosylation, type Ik, 608540
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alg1ENSDARG00000054963Danio rerio
 ENSGALG00000002067Gallus gallus
 Alg1ENSMUSG00000039427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ALG1L2 / C9J202 / ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase like 2ENSG0000025128740
ALG1L / Q6GMV1 / ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase likeENSG0000018936634


Protein motifs (from Interpro)
Interpro ID Name
 IPR001296  Glycosyl transferase, family 1
 IPR026051  Chitobiosyldiphosphodolichol beta-mannosyltransferase ALG1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation TAS
 biological_processGO:0006488 dolichol-linked oligosaccharide biosynthetic process TAS
 biological_processGO:0097502 mannosylation IEA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000030 mannosyltransferase activity TAS
 molecular_functionGO:0004578 chitobiosyldiphosphodolichol beta-mannosyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective ALG1 causes ALG1-CDG (CDG-1k)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000233 Thin vermillion border 
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001399 Hepatic failure 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001522 Death in infancy 
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 HP:0001560 Abnormality of the amniotic fluid "Abnormality of the amniotic fluid, which is the fluid contained in the amniotic sac surrounding the developing fetus." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001790 Nonimmune hydrops fetalis 
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 HP:0002059 Cerebral atrophy 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0003642 Abnormal isoelectric focusing of serum transferrin (type 1 pattern) 
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 HP:0010978 Abnormality of immune system physiology "A functional abnormality of the `immune system` (FMA:9825)." [HPO:probinson, MP:0001790]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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