ENSG00000038002


Homo sapiens

Features
Gene ID: ENSG00000038002
  
Biological name :AGA
  
Synonyms : AGA / aspartylglucosaminidase / P20933
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: q34.3
Gene start: 177430770
Gene end: 177442503
  
Corresponding Affymetrix probe sets: 204332_s_at (Human Genome U133 Plus 2.0 Array)   204333_s_at (Human Genome U133 Plus 2.0 Array)   216064_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000264595
Ensembl peptide - ENSP00000421471
Ensembl peptide - ENSP00000423798
NCBI entrez gene - 175     See in Manteia.
OMIM - 613228
RefSeq - NM_001171988
RefSeq - NM_000027
RefSeq Peptide - NP_000018
RefSeq Peptide - NP_001165459
swissprot - P20933
swissprot - H0Y8L9
swissprot - H0Y9C7
Ensembl - ENSG00000038002
  
Related genetic diseases (OMIM): 208400 - Aspartylglucosaminuria, 208400
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 agaENSDARG00000004889Danio rerio
 AGAENSGALG00000010716Gallus gallus
 AgaENSMUSG00000031521Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TASP1 / Q9H6P5 / taspase 1ENSG0000008912324
ASRGL1 / Q7L266 / asparaginase like 1ENSG0000016217422


Protein motifs (from Interpro)
Interpro ID Name
 IPR000246  Peptidase T2, asparaginase 2
 IPR029055  Nucleophile aminohydrolases, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006517 protein deglycosylation IMP
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0051604 protein maturation IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IMP
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0043621 protein self-association IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000053 Macroorchidism "The presence of abnormally large testes." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000212 Gingival hyperplasia 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000283 Broad face 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000389 Chronic otitis media 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000670 Carious teeth 
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 HP:0000750 Impaired language development 
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0000943 Dysostosis multiplex 
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 HP:0001061 Acne 
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 HP:0001071 Angiokeratoma corporis diffusum 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001369 Arthritis 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001388 Joint laxity 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001609 Hoarse voice 
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 HP:0001653 Mitral regurgitation "An `abnormality of the mitral valve` (HP:0001633) characterized by insufficiency or incompetence of the mitral valve resulting in retrograde leaking of blood through the mitral valve upon ventricular contraction." [HPO:probinson]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001875 Neutropenia 
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 HP:0001922 Vacuolated lymphocytes 
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 HP:0001939 Metabolism abnormality 
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 HP:0002014 Diarrhea 
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 HP:0002024 Malabsorption 
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 HP:0002059 Cerebral atrophy 
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 HP:0002167 Neurological speech impairment 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002684 Thickened calvaria "The presence of an abnormally thick calvaria." [HPO:curators]
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 HP:0002738 Hypoplastic frontal sinuses 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002756 Pathologic fracture "A pathologic fracture occurs when a bone breaks in an area that is weakened secondary to another disease process such as tumor, infection, and certain inherited bone disorders. A pathologic fracture can occur without a degree of trauma required to cause fracture in healthy bone." [HPO:curators]
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 HP:0002808 Kyphosis 
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 HP:0002997 Abnormality of the ulna "Ab abnormality of the ulna bone of the forearm." [HPO:curators]
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 HP:0003103 Abnormality of cortical bone "An abnormality of cortical bone (also known as compact bone), which forms the dense surface of bones." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003302 Spondylolisthesis 
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 HP:0003304 Spondylolysis 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004337 Abnormality of amino acid metabolism 
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 HP:0004568 Beaking of vertebral bodies 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0008430 Mild anterior beaking of lumbar vertebrae 
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 HP:0008551 Underdeveloped ears 
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 HP:0011276 Vascular skin abnormality 
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 HP:0012068 Aspartylglucosaminuria "Excretion of excess amounts of aspartylglucosamine in the urine." [HPO:probinson]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
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 HP:0100729 Large face 
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 HP:0100790 Hernia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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