ENSG00000041802


Homo sapiens

Features
Gene ID: ENSG00000041802
  
Biological name :LSG1
  
Synonyms : large 60S subunit nuclear export GTPase 1 / LSG1 / Q9H089
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q29
Gene start: 194640788
Gene end: 194672477
  
Corresponding Affymetrix probe sets: 221535_at (Human Genome U133 Plus 2.0 Array)   221536_s_at (Human Genome U133 Plus 2.0 Array)   223200_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400903
Ensembl peptide - ENSP00000408264
Ensembl peptide - ENSP00000265245
NCBI entrez gene - 55341     See in Manteia.
OMIM - 610780
RefSeq - NM_018385
RefSeq Peptide - NP_060855
swissprot - Q9H089
swissprot - F8WFC6
swissprot - H7C2X7
Ensembl - ENSG00000041802
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lsg1ENSDARG00000015352Danio rerio
 LSG1ENSGALG00000007058Gallus gallus
 Lsg1ENSMUSG00000022538Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GNL1 / P36915 / G protein nucleolar 1 (putative)ENSG0000020459025


Protein motifs (from Interpro)
Interpro ID Name
 IPR006073  GTP binding domain
 IPR023179  GTP-binding protein, orthogonal bundle domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030378  Circularly permuted (CP)-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042254 ribosome biogenesis IBA
 biological_processGO:0051168 nuclear export IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IDA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr