ENSG00000042429


Homo sapiens

Features
Gene ID: ENSG00000042429
  
Biological name :MED17
  
Synonyms : MED17 / mediator complex subunit 17 / Q9NVC6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q21
Gene start: 93784227
Gene end: 93814963
  
Corresponding Affymetrix probe sets: 221517_s_at (Human Genome U133 Plus 2.0 Array)   223115_at (Human Genome U133 Plus 2.0 Array)   232483_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431524
Ensembl peptide - ENSP00000433090
Ensembl peptide - ENSP00000492872
Ensembl peptide - ENSP00000492625
Ensembl peptide - ENSP00000492530
Ensembl peptide - ENSP00000492401
Ensembl peptide - ENSP00000492391
Ensembl peptide - ENSP00000492294
Ensembl peptide - ENSP00000491918
Ensembl peptide - ENSP00000491770
Ensembl peptide - ENSP00000491675
Ensembl peptide - ENSP00000491465
Ensembl peptide - ENSP00000491457
Ensembl peptide - ENSP00000491371
Ensembl peptide - ENSP00000491108
Ensembl peptide - ENSP00000490968
Ensembl peptide - ENSP00000433626
Ensembl peptide - ENSP00000251871
NCBI entrez gene - 9440     See in Manteia.
OMIM - 603810
RefSeq - NM_004268
RefSeq - XM_011543068
RefSeq Peptide - NP_004259
swissprot - A0A1W2PS69
swissprot - A0A1W2PS27
swissprot - A0A1W2PRX4
swissprot - A0A1W2PRS0
swissprot - A0A1W2PR99
swissprot - A0A1W2PQE4
swissprot - E9PM72
swissprot - A0A1W2PPP8
swissprot - A0A1W2PPJ7
swissprot - A0A1W2PPC8
swissprot - A0A1W2PNW7
swissprot - A0A1W2PNF3
swissprot - Q9NVC6
swissprot - A0A1W2PQ48
swissprot - E9PKQ4
swissprot - E9PJZ4
Ensembl - ENSG00000042429
  
Related genetic diseases (OMIM): 613668 - Microcephaly, postnatal progressive, with seizures and brain atrophy, 613668
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med17ENSDARG00000006345Danio rerio
 MED17ENSGALG00000017218Gallus gallus
 Med17ENSMUSG00000031935Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP001273.2ENSG0000028405795


Protein motifs (from Interpro)
Interpro ID Name
 IPR019313  Mediator complex, subunit Med17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway IDA
 biological_processGO:0030521 androgen receptor signaling pathway IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0003712 transcription coregulator activity IDA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity NAS
 molecular_functionGO:0042809 vitamin D receptor binding NAS
 molecular_functionGO:0046966 thyroid hormone receptor binding IDA


Pathways (from Reactome)
Pathway description
PPARA activates gene expression
Generic Transcription Pathway
Transcriptional regulation of white adipocyte differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002169 Clonus 
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 HP:0002506 Diffuse cerebral atrophy 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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