ENSG00000048162


Homo sapiens

Features
Gene ID: ENSG00000048162
  
Biological name :NOP16
  
Synonyms : NOP16 / NOP16 nucleolar protein / Q9Y3C1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.2
Gene start: 176383938
Gene end: 176388975
  
Corresponding Affymetrix probe sets: 203023_at (Human Genome U133 Plus 2.0 Array)   209327_s_at (Human Genome U133 Plus 2.0 Array)   213833_x_at (Human Genome U133 Plus 2.0 Array)   214011_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000427489
Ensembl peptide - ENSP00000423835
Ensembl peptide - ENSP00000478283
Ensembl peptide - ENSP00000484969
Ensembl peptide - ENSP00000483001
Ensembl peptide - ENSP00000480832
Ensembl peptide - ENSP00000479445
NCBI entrez gene - 51491     See in Manteia.
OMIM - 612861
RefSeq - XM_011534567
RefSeq - NM_001256539
RefSeq - NM_001256540
RefSeq - NM_001291305
RefSeq - NM_001291307
RefSeq - NM_001291308
RefSeq - NM_001317975
RefSeq - NM_016391
RefSeq Peptide - NP_001304904
RefSeq Peptide - NP_057475
RefSeq Peptide - NP_001243468
RefSeq Peptide - NP_001243469
RefSeq Peptide - NP_001278234
RefSeq Peptide - NP_001278236
RefSeq Peptide - NP_001278237
swissprot - D6RC60
swissprot - Q9Y3C1
swissprot - A0A087WU10
swissprot - A0A0C4DGU5
swissprot - A0A087X2G6
swissprot - D6RIC3
Ensembl - ENSG00000048162
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nop16ENSDARG00000044402Danio rerio
 NOP16ENSGALG00000003355Gallus gallus
 Nop16ENSMUSG00000025869Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019002  Ribosome biogenesis protein Nop16


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003723 RNA binding HDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr