ENSG00000050030


Homo sapiens

Features
Gene ID: ENSG00000050030
  
Biological name :NEXMIF
  
Synonyms : neurite extension and migration factor / NEXMIF / Q5QGS0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q13.3
Gene start: 74732856
Gene end: 74925485
  
Corresponding Affymetrix probe sets: 234333_at (Human Genome U133 Plus 2.0 Array)   244076_at (Human Genome U133 Plus 2.0 Array)   244370_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495800
Ensembl peptide - ENSP00000055682
Ensembl peptide - ENSP00000407055
Ensembl peptide - ENSP00000480284
NCBI entrez gene - 340533     See in Manteia.
OMIM - 300524
RefSeq - NM_001008537
RefSeq Peptide - NP_001008537
swissprot - H7C2N8
swissprot - Q5QGS0
Ensembl - ENSG00000050030
  
Related genetic diseases (OMIM): 300912 - Mental retardation, X-linked 98, 300912
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nexmifaENSDARG00000089271Danio rerio
 nexmifbENSDARG00000029296Danio rerio
 NEXMIFENSGALG00000007755Gallus gallus
 NexmifENSMUSG00000046449Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
REV3L / O60673 / REV3 like, DNA directed polymerase zeta catalytic subunitENSG0000000941317


Protein motifs (from Interpro)
Interpro ID Name
 IPR032757  Domain of unknown function DUF4683


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001953 negative regulation of cell-matrix adhesion IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0033629 negative regulation of cell adhesion mediated by integrin IEA
 biological_processGO:0042276 error-prone translesion synthesis IBA
 biological_processGO:2000048 negative regulation of cell-cell adhesion mediated by cadherin IEA
 biological_processGO:2001223 negative regulation of neuron migration IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016035 zeta DNA polymerase complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000049 Shawl scrotum "A condition in which the upper scrotal skin rises over the base of the penis." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000322 Short philtrum 
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 HP:0000565 Esotropia 
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000733 Stereotyped, repetitive behaviour 
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 HP:0000752 Hyperactivity 
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 HP:0000817 Poor eye contact 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002273 Tetraparesis 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003577 Onset at birth 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0010804 Tented upper lip vermilion "Triangular appearance of the oral aperture with the apex in the midpoint of the upper vermilion and the lower vermilion forming the base." [pmid:19125428]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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