ENSG00000067836


Homo sapiens

Features
Gene ID: ENSG00000067836
  
Biological name :ROGDI
  
Synonyms : Q9GZN7 / ROGDI / rogdi homolog
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 4796968
Gene end: 4802950
  
Corresponding Affymetrix probe sets: 218394_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468343
Ensembl peptide - ENSP00000467509
Ensembl peptide - ENSP00000468334
Ensembl peptide - ENSP00000322832
Ensembl peptide - ENSP00000464699
Ensembl peptide - ENSP00000465076
Ensembl peptide - ENSP00000465970
Ensembl peptide - ENSP00000466529
Ensembl peptide - ENSP00000467459
NCBI entrez gene - 79641     See in Manteia.
OMIM - 614574
RefSeq - XM_006720948
RefSeq - NM_024589
RefSeq - XM_006720947
RefSeq Peptide - NP_078865
swissprot - K7EPN1
swissprot - K7EPS3
swissprot - K7ERN3
swissprot - K7ERP1
swissprot - K7EID1
swissprot - Q9GZN7
swissprot - K7EJ96
swissprot - K7EMJ5
swissprot - K7EL91
Ensembl - ENSG00000067836
  
Related genetic diseases (OMIM): 226750 - Kohlschutter-Tonz syndrome, 226750
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rogdiENSDARG00000104413Danio rerio
 ROGDIENSGALG00000001841Gallus gallus
 RogdiENSMUSG00000022540Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028241  RAVE subunit 2/Rogdi


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0022008 neurogenesis IMP
 biological_processGO:0030097 hemopoiesis IEA
 biological_processGO:0042475 odontogenesis of dentin-containing tooth IMP
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000238 Hydrocephalus 
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 HP:0000705 Amelogenesis imperfecta 
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 HP:0000726 Dementia 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0002059 Cerebral atrophy 
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 HP:0002119 Ventriculomegaly 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006286 Yellow-brown discoloration of the teeth 
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr