ENSG00000086848


Homo sapiens

Features
Gene ID: ENSG00000086848
  
Biological name :ALG9
  
Synonyms : ALG9 / ALG9, alpha-1,2-mannosyltransferase / Q9H6U8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q23.1
Gene start: 111782195
Gene end: 111871581
  
Corresponding Affymetrix probe sets: 219374_s_at (Human Genome U133 Plus 2.0 Array)   228817_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000479335
Ensembl peptide - ENSP00000478246
Ensembl peptide - ENSP00000480661
Ensembl peptide - ENSP00000484200
Ensembl peptide - ENSP00000482975
Ensembl peptide - ENSP00000482437
Ensembl peptide - ENSP00000381090
Ensembl peptide - ENSP00000432442
Ensembl peptide - ENSP00000435517
Ensembl peptide - ENSP00000436798
Ensembl peptide - ENSP00000437211
NCBI entrez gene - 79796     See in Manteia.
OMIM - 606941
RefSeq - XM_017018326
RefSeq - NM_024740
RefSeq - XM_005277723
RefSeq - XM_005277724
RefSeq - XM_006718913
RefSeq - XM_011542992
RefSeq - XM_017018313
RefSeq - XM_017018314
RefSeq - XM_017018315
RefSeq - XM_017018316
RefSeq - XM_017018317
RefSeq - XM_017018318
RefSeq - XM_017018319
RefSeq - XM_017018320
RefSeq - XM_017018321
RefSeq - XM_017018322
RefSeq - XM_017018323
RefSeq - XM_017018324
RefSeq - XM_017018325
RefSeq - NM_001077690
RefSeq - NM_001077691
RefSeq - NM_001077692
RefSeq Peptide - NP_001071158
RefSeq Peptide - NP_001071159
RefSeq Peptide - NP_001071160
RefSeq Peptide - NP_001339338
RefSeq Peptide - NP_001339339
RefSeq Peptide - NP_001339340
RefSeq Peptide - NP_001339341
RefSeq Peptide - NP_001339342
RefSeq Peptide - NP_001339343
RefSeq Peptide - NP_079016
swissprot - A0A087WTZ3
swissprot - A0A087WX16
swissprot - A0A087WVC0
swissprot - H0YCW6
swissprot - H0YEX8
swissprot - H0YF48
swissprot - Q9H6U8
swissprot - A0A087WZY8
Ensembl - ENSG00000086848
  
Related genetic diseases (OMIM): 263210 - Gillessen-Kaesbach-Nishimura syndrome, 263210
  608776 - Congenital disorder of glycosylation, type Il, 608776
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alg9ENSDARG00000012840Danio rerio
 ENSGALG00000021174Gallus gallus
 Alg9ENSMUSG00000032059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP001781.2ENSG0000025852999


Protein motifs (from Interpro)
Interpro ID Name
 IPR005599  GPI mannosyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006488 dolichol-linked oligosaccharide biosynthetic process TAS
 biological_processGO:0097502 mannosylation IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000026 alpha-1,2-mannosyltransferase activity TAS
 molecular_functionGO:0000030 mannosyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0052918 dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity IEA
 molecular_functionGO:0052926 dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective ALG9 causes ALG9-CDG (CDG-1l)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000113 Polycystic kidney 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000319 Flat philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000444 Beaked nose 
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 HP:0000470 Short neck 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000565 Esotropia 
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001399 Hepatic failure 
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 HP:0001405 Periportal fibrosis 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001508 Failure to thrive 
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 HP:0001627 Cardiac abnormality "An abnormality of the `heart` (FMA:7088)." [HPO:probinson]
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 HP:0001698 Pericardial effusion 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002101 Abnormal lung lobation "Defects in the formation of pulmonary lobules." [HPO:curators]
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 HP:0002188 Delayed myelination 
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 HP:0002265 Large fleshy ears 
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002652 Skeletal dysplasia 
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 HP:0003026 Short long bones 
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 HP:0003186 Inverted nipples "The presence of nipples that instead of pointing outward are retracted inwards." [HPO:sdoelken]
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 HP:0003577 Onset at birth 
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 HP:0009487 Ulnar deviation of the hand "A deviation of the orientation of the hand in the direction of the ulna (i.e., towards the little finger)." [HPO:curators]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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