ENSG00000100075


Homo sapiens

Features
Gene ID: ENSG00000100075
  
Biological name :SLC25A1
  
Synonyms : P53007 / SLC25A1 / solute carrier family 25 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q11.21
Gene start: 19175575
Gene end: 19178830
  
Corresponding Affymetrix probe sets: 210010_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401480
Ensembl peptide - ENSP00000215882
NCBI entrez gene - 6576     See in Manteia.
OMIM - 190315
RefSeq - NM_001287387
RefSeq - NM_001256534
RefSeq - NM_005984
RefSeq Peptide - NP_001243463
RefSeq Peptide - NP_001274316
RefSeq Peptide - NP_005975
swissprot - P53007
swissprot - B4DP62
Ensembl - ENSG00000100075
  
Related genetic diseases (OMIM): 615182 - Combined D-2- and L-2-hydroxyglutaric aciduria, 615182
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-178e17.1ENSDARG00000080000Danio rerio
 slc25a1bENSDARG00000076381Danio rerio
 Q8JZU2ENSMUSG00000003528Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002067  Mitochondrial carrier protein
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006094 gluconeogenesis TAS
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0006843 mitochondrial citrate transmembrane transport IBA
 biological_processGO:0046949 fatty-acyl-CoA biosynthetic process TAS
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0015137 citrate transmembrane transporter activity TAS
 molecular_functionGO:0015142 tricarboxylic acid transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Gluconeogenesis
Fatty acyl-CoA biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000737 Irritability 
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 HP:0000817 Poor eye contact 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002094 Dyspnea 
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 HP:0002119 Ventriculomegaly 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0010307 Stridor "Stridor is a high pitched sound resulting from turbulent air flow in the upper airway." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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 HP:0040144 L-2-hydroxyglutaric aciduria 
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 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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