ENSG00000100427


Homo sapiens

Features
Gene ID: ENSG00000100427
  
Biological name :MLC1
  
Synonyms : megalencephalic leukoencephalopathy with subcortical cysts 1 / MLC1 / Q15049
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.33
Gene start: 50059391
Gene end: 50085902
  
Corresponding Affymetrix probe sets: 213395_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000379216
Ensembl peptide - ENSP00000401385
Ensembl peptide - ENSP00000310375
NCBI entrez gene - 23209     See in Manteia.
OMIM - 605908
RefSeq - XM_017028671
RefSeq - NM_015166
RefSeq - NM_139202
RefSeq - XM_011530678
RefSeq Peptide - NP_055981
RefSeq Peptide - NP_631941
swissprot - A6PVC3
swissprot - Q15049
swissprot - A0A024R4V4
Ensembl - ENSG00000100427
  
Related genetic diseases (OMIM): 604004 - Megalencephalic leukoencephalopathy with subcortical cysts, 604004
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mlc1ENSDARG00000063026Danio rerio
 MLC1ENSGALG00000040038Gallus gallus
 Mlc1ENSMUSG00000035805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033280  Membrane protein MLC1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport ISS
 biological_processGO:0032388 positive regulation of intracellular transport IDA
 biological_processGO:0047484 regulation of response to osmotic stress IMP
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0071397 cellular response to cholesterol ISS
 biological_processGO:0072584 caveolin-mediated endocytosis ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005769 early endosome ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005901 caveola IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045121 membrane raft ISS
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0055037 recycling endosome ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008565 protein transporter activity IEA
 molecular_functionGO:0044877 protein-containing complex binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001355 Megalencephaly "The presence of an unusually large, and usually malfunctioning brain." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0006943 Diffuse spongiform leukoencephalopathy 
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 HP:0007341 Diffuse swelling of cerebral white matter 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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