ENSG00000100578


Homo sapiens

Features
Gene ID: ENSG00000100578
  
Biological name :KIAA0586
  
Synonyms : KIAA0586 / Q9BVV6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q23.1
Gene start: 58427385
Gene end: 58551289
  
Corresponding Affymetrix probe sets: 205631_at (Human Genome U133 Plus 2.0 Array)   37232_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000478083
Ensembl peptide - ENSP00000452536
Ensembl peptide - ENSP00000481936
Ensembl peptide - ENSP00000261244
Ensembl peptide - ENSP00000346359
Ensembl peptide - ENSP00000399427
Ensembl peptide - ENSP00000450855
Ensembl peptide - ENSP00000451356
Ensembl peptide - ENSP00000451831
Ensembl peptide - ENSP00000452351
NCBI entrez gene - 9786     See in Manteia.
OMIM - 610178
RefSeq - NM_001244189
RefSeq - NM_001244191
RefSeq - NM_001244192
RefSeq - NM_001244193
RefSeq - NM_014749
RefSeq - NM_001244190
RefSeq Peptide - NP_001231118
RefSeq Peptide - NP_001231120
RefSeq Peptide - NP_001231121
RefSeq Peptide - NP_001231122
RefSeq Peptide - NP_055564
RefSeq Peptide - NP_001231119
swissprot - Q9BVV6
swissprot - A0A087WYM5
swissprot - G3V2T5
swissprot - G3V4J0
swissprot - G3V5U9
swissprot - H0YJF0
Ensembl - ENSG00000100578
  
Related genetic diseases (OMIM): 616490 - Joubert syndrome 23, 616490
  616546 - Short-rib thoracic dysplasia 14 with polydactyly, 616546
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU179699.1ENSDARG00000096963Danio rerio
 TA3ENSGALG00000012025Gallus gallus
 E9PV87ENSMUSG00000034601Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029246  Protein TALPID3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0070201 regulation of establishment of protein localization IMP
 cellular_componentGO:0001917 photoreceptor inner segment IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IBA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0036064 ciliary basal body IDA
 cellular_componentGO:0042995 cell projection IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000083 Renal failure 
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 HP:0000110 Renal dysplasia 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000202 Cleft lip/palate 
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 HP:0000238 Hydrocephalus 
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 HP:0000276 Long face 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000480 Retinal coloboma 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000545 Myopia 
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 HP:0000556 Retinal dystrophy 
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 HP:0000572 Visual loss 
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 HP:0000589 Coloboma "A developmental defect characterized by a cleft of some portion of the `eye` (FMA:54448`) or ocular adnexa." [HPO:probinson]
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 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000657 Oculomotor apraxia 
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0000803 Renal cortical cysts 
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 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
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 HP:0000890 Long clavicles 
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 HP:0001156 Brachydactyly 
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 HP:0001161 Polydactyly (hands) 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001273 Abnormality of the corpus callosum "Abnormality of the corpus callosum, which is a broad thick band of nerve fibers that connects the right and left cerebral hemispheres." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001305 Dandy-Walker malformation "A congenital brain malformation typically characterized by incomplete formation of the cerebellar vermis, dilation of the fourth ventricle, and enlargement of the posterior fossa. In layman s terms, Dandy Walker malformation is a cyst in the cerebellum (typically symmetrical) that is involved with the fourth ventricle. This may interfere with the body s ability to drain cerebrospinal fluid from the brain, resulting in hydrocephalus. Dandy Walker cysts are formed during early embryonic development, while the brain forms. The cyst in the cerebellum typically has several blood vessels running through it connecting to the brain, thereby prohibiting surgical removal." [HPO:curators]
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 HP:0001320 Cerebellar vermis hypoplasia 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001331 Absent septum pellucidum "Absence of the septum pellucidum." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001508 Failure to thrive 
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 HP:0001561 Polyhydramnios 
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 HP:0001591 Bell-shaped chest 
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0001829 Polydactyly (feet) 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002084 Encephalocele 
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 HP:0002085 Occipital encephalocele 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002100 Aspiration pneumonia 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002134 Abnormality of the basal ganglia "Abnormality of the basal ganglia, which are a group of nuclei (striatum, pallidum substantia nigra, and the subthalamic nucleus) at the base of the forebrain that are connected to the cerebral cortex, the thalamus, and other areas. The basal ganglia subserve motor functions that are distinct from those of the pyramidal (corticospinal) tract, for which reason neurologic abnormalities caused by lesions to the basal ganglia are often referred to as extrapyramidal." [HPO:curators]
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 HP:0002195 Dysgenesis or agenesis of the cerebellar vermis 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
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 HP:0002280 Enlarged cisterna magna 
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 HP:0002323 Anencephaly 
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 HP:0002419 Molar tooth sign on MRI 
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 HP:0002435 Meningocele 
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 HP:0002516 Increased intracranial pressure 
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 HP:0002553 Arched eyebrows 
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 HP:0002558 Supernumerary nipples 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002789 Tachypnea 
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 HP:0002876 Tachypnea, episodic 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0002983 Micromelia 
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 HP:0003170 Abnormality of the acetabulum "An abnormality of the acetabulum, which together with the head of the femur forms the hip joint." [HPO:curators]
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 HP:0003312 Abnormal form of the vertebral bodies 
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 HP:0003411 Irregular proximal femoral metaphyses 
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 HP:0004422 Biparietal narrowing "A narrowing of the biparietal diameter (i.e., of the transverse distance between the protuberances of the two parietal bones of the skull)." [HPO:curators]
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 HP:0004629 small cervical vertebral bodies 
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 HP:0004719 enlarged, hyperechogenic kidneys 
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 HP:0004991 rhizomelic arm shortening 
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 HP:0005257 Thoracic hypoplasia 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005989 Redundant neck skin 
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 HP:0006528 Chronic lung disease 
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 HP:0006610 Wide intermamillary distance 
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 HP:0006660 Aplastic clavicles 
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 HP:0006668 Twelfth rib hypoplasia 
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 HP:0006956 Dilation of lateral ventricles 
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 HP:0006989 Dysplastic corpus callosum 
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 HP:0007033 Cerebellar dysplasia 
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 HP:0007082 Enlarged lateral and third ventricles 
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0008445 Narrow cervical spinal canal 
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 HP:0008797 Early ossification of capital femoral epiphyses 
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 HP:0008872 Feeding problems in infancy 
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 HP:0009921 Duane anomaly "Duane anomaly is a congenital eye movement impairment with limitation of the ability to adduct or abduct the eye. When affected eyes are adducted (moved inwards towards the nose), the eyeball retracts and the palpebral fissure narrows." [HPO:curators]
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 HP:0010013 Abnormality of the 5th metacarpal "Any abnormality of the fifth metacarpal bone." [HPO:curators]
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 HP:0010442 Polydactyly 
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0011933 Elongated superior cerebellar peduncle "Increased length of the `superior cerebellar peduncle` (FMA:72495)." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012106 Rhizomelic leg shortening "Disproportionate shortening of the proximal segment of the leg (i.e. the femur)." [HPO:probinson]
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 HP:0012795 Abnormality of the optic disc "A morphological abnormality of the optic disc, i.e., of the portion of the optic nerve clinically visible on fundoscopic examination." [HPO:probinson]
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 HP:0030048 Colpocephaly "Colpocephaly is an anatomic finding in the brain manifested by occipital horns that are disproportionately enlarged in comparison with other parts of the lateral ventricles." []
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 HP:0031528 Subretinal deposits "Deposits accumulating between the outer retina and the retinal pigment epithelium." []
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 HP:0100258 Preaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the thumb or great toe." [HPO:probinson]
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 HP:0100259 Postaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the fifth finger or fifth toe." [HPO:probinson]
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 HP:0100954 Open operculum "Underdevelopment of the operculum." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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