ENSG00000101935


Homo sapiens

Features
Gene ID: ENSG00000101935
  
Biological name :AMMECR1
  
Synonyms : Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 / AMMECR1 / Q9Y4X0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q23
Gene start: 110194186
Gene end: 110440233
  
Corresponding Affymetrix probe sets: 1553219_a_at (Human Genome U133 Plus 2.0 Array)   204976_s_at (Human Genome U133 Plus 2.0 Array)   226421_at (Human Genome U133 Plus 2.0 Array)   236760_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361127
Ensembl peptide - ENSP00000361129
Ensembl peptide - ENSP00000262844
NCBI entrez gene - 9949     See in Manteia.
OMIM - 300195
RefSeq - NM_001025580
RefSeq - NM_001171689
RefSeq - NM_015365
RefSeq Peptide - NP_056180
RefSeq Peptide - NP_001020751
RefSeq Peptide - NP_001165160
swissprot - Q9Y4X0
swissprot - A0A0S2Z4X0
swissprot - A0A0S2Z4V0
Ensembl - ENSG00000101935
  
Related genetic diseases (OMIM): 300990 - Midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis, 300990
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ammecr1ENSDARG00000012892Danio rerio
 AMMECR1ENSGALG00000008074Gallus gallus
 Q9JHT5ENSMUSG00000042225Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6DCA0 / AMMECR1L / AMMECR1 likeENSG0000014423360


Protein motifs (from Interpro)
Interpro ID Name
 IPR002733  AMMECR1 domain
 IPR023473  AMMECR1
 IPR027485  AMMECR1, N-terminal
 IPR036071  AMMECR1 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000083 Renal failure 
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 HP:0000093 Proteinuria 
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 HP:0000233 Thin vermillion border 
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000545 Myopia 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0001182 Tapered fingers 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001595 Hair abnormality 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001646 Abnormality of the aortic valve "Any abnormality of the `aortic valve` (FMA:7236)." [HPO:curators]
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 HP:0001883 Talipes 
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 HP:0002150 Hypercalciuria 
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 HP:0002907 Microscopic hematuria 
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 HP:0004445 Elliptocytosis 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011069 Increased number of teeth "The presence of a `supernumerary` (PATO:0000470), i.e., extra, `tooth` (FMA:12516) or teeth." [HPO:ibailleulforestier]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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