ENSG00000102144


Homo sapiens

Features
Gene ID: ENSG00000102144
  
Biological name :PGK1
  
Synonyms : P00558 / PGK1 / phosphoglycerate kinase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q21.1
Gene start: 77910739
Gene end: 78129296
  
Corresponding Affymetrix probe sets: 1558365_at (Human Genome U133 Plus 2.0 Array)   200737_at (Human Genome U133 Plus 2.0 Array)   200738_s_at (Human Genome U133 Plus 2.0 Array)   217356_s_at (Human Genome U133 Plus 2.0 Array)   217383_at (Human Genome U133 Plus 2.0 Array)   227068_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362413
Ensembl peptide - ENSP00000496140
NCBI entrez gene - 5230     See in Manteia.
OMIM - 311800
RefSeq - NM_000291
RefSeq Peptide - NP_000282
swissprot - P00558
swissprot - V9HWF4
Ensembl - ENSG00000102144
  
Related genetic diseases (OMIM): 300653 - Phosphoglycerate kinase 1 deficiency, 300653
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pgk1ENSDARG00000054191Danio rerio
 PGK1ENSGALG00000007936Gallus gallus
 Pgk1ENSMUSG00000062070Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PGK2 / P07205 / phosphoglycerate kinase 2ENSG0000017095061


Protein motifs (from Interpro)
Interpro ID Name
 IPR001576  Phosphoglycerate kinase
 IPR015824  Phosphoglycerate kinase, N-terminal
 IPR015911  Phosphoglycerate kinase, conserved site
 IPR036043  Phosphoglycerate kinase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006094 gluconeogenesis TAS
 biological_processGO:0006096 glycolytic process IMP
 biological_processGO:0016310 phosphorylation ISS
 biological_processGO:0016525 negative regulation of angiogenesis IMP
 biological_processGO:0030855 epithelial cell differentiation IEP
 biological_processGO:0031639 plasminogen activation IMP
 biological_processGO:0061621 canonical glycolysis TAS
 biological_processGO:0071456 cellular response to hypoxia IDA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0045121 membrane raft IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004618 phosphoglycerate kinase activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding ISS
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047134 protein-disulfide reductase activity IMP


Pathways (from Reactome)
Pathway description
Glycolysis
Gluconeogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000083 Renal failure 
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 HP:0000556 Retinal dystrophy 
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 HP:0000572 Visual loss 
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 HP:0000712 Emotional lability 
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 HP:0000750 Impaired language development 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001878 Hemolytic anemia 
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 HP:0001923 Reticulocytosis 
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 HP:0002076 Migraine 
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 HP:0003198 Myopathy 
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 HP:0003201 Rhabdomyolysis 
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 HP:0003546 Exercise intolerance 
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 HP:0003710 Muscle cramps with exercise 
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 HP:0003812 Phenotypic variability 
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 HP:0008305 Myoglobinuria, exercise-induced 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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