ENSG00000102743


Homo sapiens

Features
Gene ID: ENSG00000102743
  
Biological name :SLC25A15
  
Synonyms : Q9Y619 / SLC25A15 / solute carrier family 25 member 15
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q14.11
Gene start: 40789412
Gene end: 40810111
  
Corresponding Affymetrix probe sets: 218653_at (Human Genome U133 Plus 2.0 Array)   222705_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415826
Ensembl peptide - ENSP00000342267
Ensembl peptide - ENSP00000431429
NCBI entrez gene - 10166     See in Manteia.
OMIM - 603861
RefSeq - NM_014252
RefSeq Peptide - NP_055067
swissprot - Q9Y619
swissprot - F2Z354
swissprot - Q5VZD9
Ensembl - ENSG00000102743
  
Related genetic diseases (OMIM): 238970 - Hyperornithinemia-hyperammonemia-homocitrullinemia syndrome, 238970
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc25a15aENSDARG00000063539Danio rerio
 slc25a15bENSDARG00000062271Danio rerio
 SLC25A15ENSGALG00000017032Gallus gallus
 Q9WVD5ENSMUSG00000031482Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BXI2 / SLC25A2 / solute carrier family 25 member 2ENSG0000012032987


Protein motifs (from Interpro)
Interpro ID Name
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000050 urea cycle TAS
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:1990575 mitochondrial L-ornithine transmembrane transport TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000064 L-ornithine transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Urea cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000533 Chorioretinal atrophy 
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0001249 Mental retardation 
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001328 Learning disability 
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 HP:0001410 Decreased liver function 
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 HP:0001508 Failure to thrive 
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 HP:0001987 Hyperammonemia 
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 HP:0002038 Protein avoidance 
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 HP:0002062 Abnormality of the pyramidal tracts "An abnormality of the pyramidal system of motor neurons, whose chief element, the corticospinal tract, is the only direct connection between the brain and the spinal cord. In addition to the corticospinal tract, the pyramidal system includes the corticobulbar, corticomesencephalic, and corticopontine tracts." [HPO:curators]
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002123 Myoclonic seizures "Myoclonic seizures are sudden, brief losses of consciousness and postural tone not associated with tonic muscular contractions. Myoclonic seizures may involve one body part or the entire body. In the latter case, the myoclonic seizure is accompanied by a violent fall but not by loss of consciousness." [HPO:curators]
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 HP:0002169 Clonus 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002313 Spastic paraparesis 
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 HP:0002370 Poor coordination 
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002572 Episodic vomiting "Paroxysmal, recurrent episodes of vomiting." [HPO:curators]
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 HP:0003812 Phenotypic variability 
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 HP:0006846 Acute encephalopathy 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007894 Hypopigmentation of the fundus 
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 HP:0012026 Hyperornithinemia "Increased concentration of `ornithine` (CHEBI:18257) in the blood." [HPO:probinson]
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 HP:0200119 Acute hepatitis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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