ENSG00000102886


Homo sapiens

Features
Gene ID: ENSG00000102886
  
Biological name :GDPD3
  
Synonyms : GDPD3 / glycerophosphodiester phosphodiesterase domain containing 3 / Q7L5L3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p11.2
Gene start: 30104810
Gene end: 30113856
  
Corresponding Affymetrix probe sets: 219722_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454472
Ensembl peptide - ENSP00000455508
Ensembl peptide - ENSP00000384363
NCBI entrez gene - 79153     See in Manteia.
OMIM - 616318
RefSeq - NM_024307
RefSeq Peptide - NP_077283
swissprot - Q7L5L3
swissprot - H3BMN9
swissprot - H3BPX3
Ensembl - ENSG00000102886
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gdpd3aENSDARG00000074466Danio rerio
 gdpd3bENSDARG00000006944Danio rerio
 Gdpd3ENSMUSG00000030703Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GDPD1 / Q8N9F7 / glycerophosphodiester phosphodiesterase domain containing 1ENSG0000015398241


Protein motifs (from Interpro)
Interpro ID Name
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006644 phospholipid metabolic process IEA
 biological_processGO:0034638 phosphatidylcholine catabolic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Glycerophospholipid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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