ENSG00000103051


Homo sapiens

Features
Gene ID: ENSG00000103051
  
Biological name :COG4
  
Synonyms : COG4 / component of oligomeric golgi complex 4 / Q9H9E3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q22.1
Gene start: 70480568
Gene end: 70523565
  
Corresponding Affymetrix probe sets: 212189_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000455693
Ensembl peptide - ENSP00000463732
Ensembl peptide - ENSP00000461912
Ensembl peptide - ENSP00000456653
Ensembl peptide - ENSP00000315775
Ensembl peptide - ENSP00000377236
Ensembl peptide - ENSP00000432802
Ensembl peptide - ENSP00000434160
Ensembl peptide - ENSP00000454573
NCBI entrez gene - 25839     See in Manteia.
OMIM - 606976
RefSeq - NM_001195139
RefSeq - NM_015386
RefSeq - XM_011522981
RefSeq Peptide - NP_001182068
RefSeq Peptide - NP_056201
swissprot - E9PRT5
swissprot - J3QLW1
swissprot - Q9H9E3
swissprot - J3KRB5
swissprot - A0A0A0MS45
swissprot - H3BMV9
swissprot - H3BQB2
swissprot - H3BSD2
swissprot - J3KNI1
Ensembl - ENSG00000103051
  
Related genetic diseases (OMIM): 613489 - Congenital disorder of glycosylation, type IIj, 613489
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cog4ENSDARG00000054264Danio rerio
 COG4ENSGALG00000002603Gallus gallus
 Cog4ENSMUSG00000031753Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013167  Conserved oligomeric Golgi complex, subunit 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000301 retrograde transport, vesicle recycling within Golgi IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IMP
 biological_processGO:0007030 Golgi organization IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0048213 Golgi vesicle prefusion complex stabilization IMP
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0017119 Golgi transport complex IDA
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001399 Hepatic failure 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001531 Failure to thrive in infancy 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001873 Thrombocytopenia 
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 HP:0001999 Facial dysmorphism 
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 HP:0002028 Chronic diarrhea 
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 HP:0002059 Cerebral atrophy 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002254 Intermittent diarrhea 
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 HP:0002509 Limb hypertonia 
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 HP:0002788 Recurrent upper respiratory tract infections 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003124 Hypercholesterolemia 
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 HP:0003155 Elevated alkaline phosphatase "Abnormally increased serum levels of `alkaline phosphatase activity` (GO:0004035)." [HPO:probinson]
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 HP:0003256 Abnormalities of the clotting factors 
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 HP:0004798 Gastrointestinal infections 
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 HP:0006583 Fatal liver failure in infancy 
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 HP:0006892 Cerebral atrophy, frontotemporal, progressive 
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 HP:0008935 Hypotonia, neonatal, generalized 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0011172 Complex febrile seizures "Febrile seizures with focal semiology, duration of more than 15 minutes, or occurring in a cluster of 2 or more convulsions within 24 hours." [HPO:jalbers]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012301 Type II transferrin isoform profile "Abnormal transferrin isoform profile consistent with a type II congenital disorder of glycosylation." [HPO:probinson, pmid:15105360]
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 HP:0012358 Abnormal protein O-linked glycosylation "An anomaly of `protein O-linked glycosylation` (GO:0006493), i.e., of the process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of a serine or threonine residue." [HPO:probinson]
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 HP:0040187 Neonatal sepsis 
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 HP:0100874 Thick hair "Increased density of `hairs` (FMA:53667), i.e., and elevanted number of hairs per unit area." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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