ENSG00000103089


Homo sapiens

Features
Gene ID: ENSG00000103089
  
Biological name :FA2H
  
Synonyms : FA2H / fatty acid 2-hydroxylase / Q7L5A8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q23.1
Gene start: 74712955
Gene end: 74774831
  
Corresponding Affymetrix probe sets: 219429_at (Human Genome U133 Plus 2.0 Array)   234963_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000479548
Ensembl peptide - ENSP00000219368
Ensembl peptide - ENSP00000455126
Ensembl peptide - ENSP00000464576
NCBI entrez gene - 79152     See in Manteia.
OMIM - 611026
RefSeq - XM_011523319
RefSeq - NM_024306
RefSeq - XM_011523317
RefSeq Peptide - NP_077282
swissprot - A0A087WVM8
swissprot - Q7L5A8
swissprot - H3BP32
swissprot - J3QS89
Ensembl - ENSG00000103089
  
Related genetic diseases (OMIM): 612319 - Spastic paraplegia 35, autosomal recessive, 612319
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fa2hENSDARG00000090063Danio rerio
 FA2HENSGALG00000002775Gallus gallus
 Fa2hENSMUSG00000033579Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001199  Cytochrome b5-like heme/steroid binding domain
 IPR006694  Fatty acid hydroxylase
 IPR014430  Sterol desaturase Scs7
 IPR018506  Cytochrome b5, heme-binding site
 IPR036400  Cytochrome b5-like heme/steroid binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001949 sebaceous gland cell differentiation IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IBA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process TAS
 biological_processGO:0030258 lipid modification IEA
 biological_processGO:0032286 central nervous system myelin maintenance IEA
 biological_processGO:0032287 peripheral nervous system myelin maintenance IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0042634 regulation of hair cycle IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031090 organelle membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0080132 fatty acid alpha-hydroxylase activity TAS


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000012 Urinary urgency 
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000298 Mask-like facies 
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 HP:0000467 Neck muscle weakness 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000544 External ophthalmoplegia 
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 HP:0000602 Ophthalmoplegia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000657 Oculomotor apraxia 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001285 Spastic tetraparesis "Spastic weakness affecting all four limbs." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0002061 Lower limb spasticity 
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002180 Neurodegeneration 
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 HP:0002313 Spastic paraparesis 
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 HP:0002355 Difficulty walking 
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 HP:0002359 Frequent falls 
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 HP:0002518 Periventricular white matter changes 
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 HP:0002607 Bowel incontinence 
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 HP:0002808 Kyphosis 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0005656 Positional foot deformities "A foot deformity resulting due to an abnormality affecting the muscle and soft tissue. In contrast if the bones of the foot are affected the term structural foot deformity applies." [HPO:curators]
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 HP:0006879 Pontocerebellar atrophy 
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 HP:0006895 Lower limb hypertonia 
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 HP:0006978 Dysmyelinating leukodystrophy 
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 HP:0007325 Generalized dystonia 
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 HP:0007366 Atrophy/Degeneration affecting the brainstem 
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 HP:0007371 Atrophy/Degeneration of the corpus callosum "The presence of atrophy (wasting) of the corpus callosum." [HPO:sdoelken]
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0010677 Enuresis nocturna "`Enuresis` (HP:0000805) occuring during sleeping hours." [HPO:sdoelken]
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 HP:0011096 Peripheral demyelination "A loss of myelin from the internode regions along myelinated nerve fibers of the peripheral nervous system." [HPO:probinson]
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0012677 Iron accumulation in globus pallidus "An abnormal build up of iron (Fe) in the globus pallidus." [HPO:probinson]
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 HP:0100515 Pollakisuria "Increased frequency of urination." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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