ENSG00000103356


Homo sapiens

Features
Gene ID: ENSG00000103356
  
Biological name :EARS2
  
Synonyms : EARS2 / glutamyl-tRNA synthetase 2, mitochondrial / Q5JPH6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p12.2
Gene start: 23522014
Gene end: 23557731
  
Corresponding Affymetrix probe sets: 1555437_at (Human Genome U133 Plus 2.0 Array)   1563796_s_at (Human Genome U133 Plus 2.0 Array)   225993_at (Human Genome U133 Plus 2.0 Array)   227374_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458604
Ensembl peptide - ENSP00000456467
Ensembl peptide - ENSP00000457107
Ensembl peptide - ENSP00000395196
Ensembl peptide - ENSP00000455519
Ensembl peptide - ENSP00000455789
Ensembl peptide - ENSP00000455875
Ensembl peptide - ENSP00000456218
NCBI entrez gene - 124454     See in Manteia.
OMIM - 612799
RefSeq - XM_011545739
RefSeq - NM_001083614
RefSeq - NM_001308211
RefSeq - XM_011545738
RefSeq Peptide - NP_001295140
RefSeq Peptide - NP_001077083
swissprot - H3BPY3
swissprot - H3BQI0
swissprot - H3BQP8
swissprot - I3L166
swissprot - H3BTB7
swissprot - Q5JPH6
Ensembl - ENSG00000103356
  
Related genetic diseases (OMIM): 614924 - Combined oxidative phosphorylation deficiency 12, 614924
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:153247ENSDARG00000103099Danio rerio
 EARS2ENSGALG00000006122Gallus gallus
 Ears2ENSMUSG00000030871Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000924  Glutamyl/glutaminyl-tRNA synthetase
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR004527  Glutamate-tRNA ligase, bacterial/mitochondrial
 IPR008925  Aminoacyl-tRNA synthetase, class I, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR020058  Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
 IPR020061  Glutamine-tRNA ligase, alpha-bundle domain superfamily
 IPR020751  Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2
 IPR033910  Glutamyl-tRNA synthetase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006424 glutamyl-tRNA aminoacylation IDA
 biological_processGO:0043039 tRNA aminoacylation IEA
 biological_processGO:0070127 tRNA aminoacylation for mitochondrial protein translation IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004818 glutamate-tRNA ligase activity IDA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0050561 glutamate-tRNA(Gln) ligase activity IDA


Pathways (from Reactome)
Pathway description
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001285 Spastic tetraparesis "Spastic weakness affecting all four limbs." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001396 Cholestasis 
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 HP:0001403 Macrovesicular steatosis 
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 HP:0001508 Failure to thrive 
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002352 Leukoencephalopathy 
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 HP:0002376 Developmental regression 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003200 Ragged-red muscle fibers "An abnormal appearance of muscle fibers observed on muscle biopsy. Ragged red fibers can be visualized with Gomori trichrome (GT) staining as irregular and intensely red subsarcolemmal zones, whereas the normal myofibrils are green. The margins of affect fibers appear red and ragged." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0006989 Dysplastic corpus callosum 
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 HP:0008347 Decreased activity of mitochondrial respiratory complexes i, ii+iii, and iv 
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 HP:0011923 Decreased activity of mitochondrial complex I "A reduction in the activity of the `mitochondrial respiratory chain complex I` (GO:0005747), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0011924 Decreased activity of mitochondrial complex III "A reduction in the activity of the `mitochondrial respiratory chain complex III` (GO:0005750), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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