ENSG00000104369


Homo sapiens

Features
Gene ID: ENSG00000104369
  
Biological name :JPH1
  
Synonyms : JPH1 / junctophilin 1 / Q9HDC5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q21.11
Gene start: 74234700
Gene end: 74321328
  
Corresponding Affymetrix probe sets: 1553533_at (Human Genome U133 Plus 2.0 Array)   229139_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429652
Ensembl peptide - ENSP00000344488
NCBI entrez gene - 56704     See in Manteia.
OMIM - 605266
RefSeq - XM_005251275
RefSeq - NM_001317830
RefSeq - NM_020647
RefSeq - XM_005251274
RefSeq Peptide - NP_065698
RefSeq Peptide - NP_001304759
swissprot - Q9HDC5
swissprot - E5RHU9
Ensembl - ENSG00000104369
  
Related genetic diseases (OMIM): 607831 - ?Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2K, 607831
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 jph1aENSDARG00000058603Danio rerio
 jph1bENSDARG00000038826Danio rerio
 JPH1ENSGALG00000035845Gallus gallus
 Jph1ENSMUSG00000042686Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
JPH3 / Q8WXH2 / junctophilin 3ENSG0000015411851
JPH2 / Q9BR39 / junctophilin 2ENSG0000014959650
JPH4 / Q96JJ6 / junctophilin 4ENSG0000009205136


Protein motifs (from Interpro)
Interpro ID Name
 IPR003409  MORN motif
 IPR017191  Junctophilin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0060314 regulation of ryanodine-sensitive calcium-release channel activity TAS
 biological_processGO:0060402 calcium ion transport into cytosol TAS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0014701 junctional sarcoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0030314 junctional membrane complex NAS
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0008307 structural constituent of muscle IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001284 Areflexia 
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 HP:0001425 Heterogeneous 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002936 Distal sensory impairment 
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003450 Axonal regeneration on nerve biopsy 
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 HP:0003593 Early onset 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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