ENSG00000104381


Homo sapiens

Features
Gene ID: ENSG00000104381
  
Biological name :GDAP1
  
Synonyms : ganglioside induced differentiation associated protein 1 / GDAP1 / Q8TB36
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q21.11
Gene start: 74321130
Gene end: 74488872
  
Corresponding Affymetrix probe sets: 221279_at (Human Genome U133 Plus 2.0 Array)   226269_at (Human Genome U133 Plus 2.0 Array)   226271_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000430136
Ensembl peptide - ENSP00000220822
Ensembl peptide - ENSP00000417006
NCBI entrez gene - 54332     See in Manteia.
OMIM - 606598
RefSeq - XM_017013585
RefSeq - NM_001040875
RefSeq - NM_018972
RefSeq - XM_011517551
RefSeq - XM_011517552
RefSeq Peptide - NP_001035808
RefSeq Peptide - NP_061845
swissprot - Q8TB36
swissprot - E5RGI2
Ensembl - ENSG00000104381
  
Related genetic diseases (OMIM): 214400 - Charcot-Marie-Tooth disease, type 4A, 214400
  607706 - Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, 607706
  607831 - Charcot-Marie-Tooth disease, axonal, type 2K, 607831
  608340 - Charcot-Marie-Tooth disease, recessive intermediate, A, 608340
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gdap1ENSDARG00000058601Danio rerio
 GDAP1ENSGALG00000042798Gallus gallus
 Gdap1ENSMUSG00000025777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96MZ0 / GDAP1L1 / ganglioside induced differentiation associated protein 1 like 1ENSG0000012419453


Protein motifs (from Interpro)
Interpro ID Name
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR034336  Ganglioside-induced differentiation-associated protein 1
 IPR036249  Thioredoxin-like superfamily
 IPR036282  Glutathione S-transferase, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000266 mitochondrial fission IDA
 biological_processGO:0006626 protein targeting to mitochondrion IMP
 biological_processGO:0006749 glutathione metabolic process IBA
 biological_processGO:0008053 mitochondrial fusion IMP
 biological_processGO:0032526 response to retinoic acid IEA
 biological_processGO:0071305 cellular response to vitamin D IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane IDA
 molecular_functionGO:0004364 glutathione transferase activity IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000764 Axonal degeneration 
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001178 Claw hand deformities (in severe cases) 
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001371 Contractures 
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 HP:0001425 Heterogeneous 
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 HP:0001604 Vocal cord paresis 
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 HP:0001761 Pes cavus 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001765 Hammer toes 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003378 Axonal degeneration/regeneration on nerve biopsy 
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003382 Hypertrophic nerve changes 
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003387 Loss of large myelinated fibers 
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 HP:0003400 Basal lamina onion bulb formations on nerve biopsy 
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 HP:0003429 Hypomyelination 
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003450 Axonal regeneration on nerve biopsy 
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 HP:0003593 Early onset 
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 HP:0003623 Onset in neonatal period 
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 HP:0003678 Rapidly progressive 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0006915 Inability to walk by childhood/adolescence 
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 HP:0007182 Hypomyelination on nerve biopsy 
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 HP:0008443 Spinal deformities 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0011096 Peripheral demyelination "A loss of myelin from the internode regions along myelinated nerve fibers of the peripheral nervous system." [HPO:probinson]
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 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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