ENSG00000106344


Homo sapiens

Features
Gene ID: ENSG00000106344
  
Biological name :RBM28
  
Synonyms : Q9NW13 / RBM28 / RNA binding motif protein 28
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q32.1
Gene start: 128297685
Gene end: 128343908
  
Corresponding Affymetrix probe sets: 218593_at (Human Genome U133 Plus 2.0 Array)   231844_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000223073
Ensembl peptide - ENSP00000420503
Ensembl peptide - ENSP00000419840
Ensembl peptide - ENSP00000418071
Ensembl peptide - ENSP00000390517
NCBI entrez gene - 55131     See in Manteia.
OMIM - 612074
RefSeq - XM_017012390
RefSeq - NM_001166135
RefSeq - NM_018077
RefSeq - XM_011516370
RefSeq - XM_017012389
RefSeq Peptide - NP_001159607
RefSeq Peptide - NP_060547
swissprot - C9JAA9
swissprot - H7C5G8
swissprot - Q9NW13
swissprot - A0A024R753
swissprot - C9JE21
Ensembl - ENSG00000106344
  
Related genetic diseases (OMIM): 612079 - ?Alopecia, neurologic defects, and endocrinopathy syndrome, 612079
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm28ENSDARG00000025332Danio rerio
 Rbm28ENSMUSG00000029701Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000670 Carious teeth 
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 HP:0000771 Gynecomastia 
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 HP:0000823 Delayed puberty 
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 HP:0000846 Adrenal insufficiency 
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 HP:0000953 Hyperpigmentation 
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 HP:0000995 Pigmented nevi "The presence of increased numbers of pigmented nevi, that is, of small, dark spots on the skin. Pigmented nevi are also known as melanocytic nevi or moles." [HPO:curators]
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 HP:0001193 Ulnar deviation of the hand or of fingers of the hand 
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 HP:0001249 Mental retardation 
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 HP:0001371 Contractures 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0002333 Motor deterioration 
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 HP:0002493 Corticospinal tract dysfunction 
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 HP:0002751 Kyphoscoliosis 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003758 Reduced subcutaneous adipose tissue "The presence of an abnormally reduced amount of subcutaneous adipose tissue." [HPO:curators]
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 HP:0009487 Ulnar deviation of the hand "A deviation of the orientation of the hand in the direction of the ulna (i.e., towards the little finger)." [HPO:curators]
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 HP:0011734 Central adrenal insufficiency "A form of adrenal insufficiency related to a lack of ACTH, which leads to a decrease in the production of cortisol by the adrenal glands. Aldosterone production is not usually affected." [DDD:spark]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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