ENSG00000111775


Homo sapiens

Features
Gene ID: ENSG00000111775
  
Biological name :COX6A1
  
Synonyms : COX6A1 / cytochrome c oxidase subunit 6A1 / P12074
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.31
Gene start: 120438090
Gene end: 120440742
  
Corresponding Affymetrix probe sets: 200925_at (Human Genome U133 Plus 2.0 Array)   224344_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000229379
NCBI entrez gene - 1337     See in Manteia.
OMIM - 602072
RefSeq - NM_004373
RefSeq Peptide - NP_004364
swissprot - H6SG15
swissprot - P12074
Ensembl - ENSG00000111775
  
Related genetic diseases (OMIM): 616039 - Charcot-Marie-Tooth disease, recessive intermediate D, 616039
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COX6A1ENSGALG00000007205Gallus gallus
 Cox6a1ENSMUSG00000041697Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COX6A2 / Q02221 / cytochrome c oxidase subunit 6A2ENSG0000015688553


Protein motifs (from Interpro)
Interpro ID Name
 IPR001349  Cytochrome c oxidase, subunit VIa
 IPR018507  Cytochrome c oxidase, subunit VIa, conserved site
 IPR036418  Cytochrome c oxidase, subunit VIa superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006091 generation of precursor metabolites and energy TAS
 biological_processGO:0006123 mitochondrial electron transport, cytochrome c to oxygen IBA
 biological_processGO:0009060 aerobic respiration IBA
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0050790 regulation of catalytic activity IEA
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0005751 mitochondrial respiratory chain complex IV IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004129 cytochrome-c oxidase activity IBA
 molecular_functionGO:0030234 enzyme regulator activity IBA


Pathways (from Reactome)
Pathway description
TP53 Regulates Metabolic Genes
Respiratory electron transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001284 Areflexia 
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 HP:0001761 Pes cavus 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003677 Slow progression 
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 HP:0009027 Foot dorsiflexor weakness 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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