ENSG00000115827


Homo sapiens

Features
Gene ID: ENSG00000115827
  
Biological name :DCAF17
  
Synonyms : DCAF17 / DDB1 and CUL4 associated factor 17 / Q5H9S7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q31.1
Gene start: 171434217
Gene end: 171485052
  
Corresponding Affymetrix probe sets: 220172_at (Human Genome U133 Plus 2.0 Array)   231921_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477604
Ensembl peptide - ENSP00000403992
Ensembl peptide - ENSP00000442238
Ensembl peptide - ENSP00000342160
Ensembl peptide - ENSP00000364404
Ensembl peptide - ENSP00000400335
NCBI entrez gene - 80067     See in Manteia.
OMIM - 612515
RefSeq - XM_017005002
RefSeq - XM_017004995
RefSeq - XM_017004996
RefSeq - XM_017004997
RefSeq - XM_017004998
RefSeq - XM_017004999
RefSeq - XM_017005000
RefSeq - XM_017005001
RefSeq - NM_001164821
RefSeq - NM_025000
RefSeq - XM_006712767
RefSeq - XM_006712768
RefSeq - XM_011511881
RefSeq - XM_011511882
RefSeq Peptide - NP_001158293
RefSeq Peptide - NP_079276
swissprot - H7C244
swissprot - H0Y2X0
swissprot - F5H7W1
swissprot - Q5H9S7
swissprot - H7C1H3
Ensembl - ENSG00000115827
  
Related genetic diseases (OMIM): 241080 - Woodhouse-Sakati syndrome, 241080
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A8WHR0ENSDARG00000074909Danio rerio
 DCAF17ENSGALG00000037327Gallus gallus
 Dcaf17ENSMUSG00000041966Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR031620  DDB1- and CUL4-associated factor 17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043687 post-translational protein modification TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000013 Hypoplastic uterus 
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000325 Triangular facies 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000426 Prominent nasal bridge 
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 HP:0000448 Prominent nose 
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 HP:0000674 Anodontia "The congenital absence of all teeth." [HPO:curators]
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 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
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 HP:0000738 Hallucinations 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000819 Diabetes mellitus 
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 HP:0000821 Hypothyroidism 
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 HP:0000831 Insulin-resistant diabetes mellitus 
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 HP:0001249 Mental retardation 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001266 Choreoathetosis 
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 HP:0001268 Mental deterioration 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0002071 Extrapyramidal signs 
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 HP:0002213 Fine hair 
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 HP:0002925 Increased serum thyroid-stimulating hormone (TSH) 
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 HP:0003077 Hyperlipidemia 
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 HP:0003812 Phenotypic variability 
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 HP:0005135 T-wave abnormalities 
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 HP:0008070 Sparse hair 
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 HP:0008209 Premature ovarian failure 
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 HP:0008214 Decreased serum estradiol 
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 HP:0008619 Hearing loss, sensorineural, bilateral 
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 HP:0008669 Impaired spermatogenesis 
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 HP:0008697 Rudimentary fallopian tubes 
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 HP:0008734 Decreased testicular size 
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 HP:0010464 Streak ovary "A developmental disorder characterized by the progressive loss of primordial germ cells in the developing ovaries of an embryo, leading to hypoplastic ovaries composed of wavy connective tissue with occasional clumps of granulosa cells, and frequenty mesonephric or hilar cells." [HPO:curators]
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 HP:0030353 Decreased serum insulin-like growth factor 1 "A reduced level of insulin-like growth factor 1 (IGF1) in the blood circulation." [HPO:probinson]
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 HP:0040171 Decreased serum testosterone level 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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