ENSG00000116668


Homo sapiens

Features
Gene ID: ENSG00000116668
  
Biological name :SWT1
  
Synonyms : Q5T5J6 / SWT1 / SWT1, RNA endoribonuclease homolog
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q25.3
Gene start: 185157080
Gene end: 185291765
  
Corresponding Affymetrix probe sets: 223548_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000356470
Ensembl peptide - ENSP00000356471
Ensembl peptide - ENSP00000401413
NCBI entrez gene - 54823     See in Manteia.
RefSeq - XM_017001530
RefSeq - NM_001105518
RefSeq - NM_017673
RefSeq - XM_011509657
RefSeq - XM_017001527
RefSeq - XM_017001528
RefSeq - XM_017001529
RefSeq - XM_005245271
RefSeq - XM_005245273
RefSeq Peptide - NP_060143
RefSeq Peptide - NP_001098988
swissprot - Q5T5J6
swissprot - Q5TC96
Ensembl - ENSG00000116668
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 swt1ENSDARG00000094010Danio rerio
 SWT1ENSGALG00000034230Gallus gallus
 Swt1ENSMUSG00000052748Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002716  PIN domain
 IPR029060  PIN-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr