ENSG00000117682


Homo sapiens

Features
Gene ID: ENSG00000117682
  
Biological name :DHDDS
  
Synonyms : dehydrodolichyl diphosphate synthase subunit / DHDDS / Q86SQ9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.11
Gene start: 26432282
Gene end: 26471294
  
Corresponding Affymetrix probe sets: 218547_at (Human Genome U133 Plus 2.0 Array)   224064_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431407
Ensembl peptide - ENSP00000405604
Ensembl peptide - ENSP00000433491
Ensembl peptide - ENSP00000436764
Ensembl peptide - ENSP00000436119
Ensembl peptide - ENSP00000434984
Ensembl peptide - ENSP00000434219
Ensembl peptide - ENSP00000434185
Ensembl peptide - ENSP00000433976
Ensembl peptide - ENSP00000236342
Ensembl peptide - ENSP00000353104
Ensembl peptide - ENSP00000363300
Ensembl peptide - ENSP00000393961
Ensembl peptide - ENSP00000397584
Ensembl peptide - ENSP00000399177
Ensembl peptide - ENSP00000399781
Ensembl peptide - ENSP00000403529
NCBI entrez gene - 79947     See in Manteia.
OMIM - 608172
RefSeq - XM_017002384
RefSeq - NM_001319959
RefSeq - NM_024887
RefSeq - NM_205861
RefSeq - XM_006710912
RefSeq - XM_006710913
RefSeq - XM_006710914
RefSeq - XM_006710915
RefSeq - XM_006710916
RefSeq - XM_006710917
RefSeq - XM_006710918
RefSeq - XM_011542183
RefSeq - XM_011542184
RefSeq - XM_011542185
RefSeq - XM_011542186
RefSeq - XM_017002379
RefSeq - XM_017002380
RefSeq - XM_017002381
RefSeq - XM_017002382
RefSeq - XM_017002383
RefSeq - NM_001243564
RefSeq - NM_001243565
RefSeq Peptide - NP_001306888
RefSeq Peptide - NP_079163
RefSeq Peptide - NP_995583
RefSeq Peptide - NP_001230493
RefSeq Peptide - NP_001230494
swissprot - E9PI64
swissprot - H0Y4T1
swissprot - Q5T0A2
swissprot - Q5T0A3
swissprot - Q5T0A6
swissprot - Q86SQ9
swissprot - E9PI09
swissprot - Q5T0A0
swissprot - E9PSH7
swissprot - Q5T0A1
swissprot - E9PRS7
swissprot - E9PR24
swissprot - E9PL99
swissprot - E9PKJ5
Ensembl - ENSG00000117682
  
Related genetic diseases (OMIM): 613861 - ?Congenital disorder of glycosylation, type 1bb, 613861
  617836 - Developmental delay and seizures with or without movement abnormalities, 617836
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhddsENSDARG00000039851Danio rerio
 DHDDSENSGALG00000029909Gallus gallus
 DhddsENSMUSG00000012117Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001441  Decaprenyl diphosphate synthase-like
 IPR018520  Di-trans-poly-cis-decaprenylcistransferase-like, conserved site
 IPR036424  Decaprenyl diphosphate synthase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006489 dolichyl diphosphate biosynthetic process TAS
 biological_processGO:0016094 polyprenol biosynthetic process IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0002094 polyprenyltransferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA


Pathways (from Reactome)
Pathway description
Synthesis of Dolichyl-phosphate
Defective DHDDS causes retinitis pigmentosa 59


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001249 Mental retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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 HP:0011505 Cystoid macular edema "Cystoid macular edema (CME) is any type of macular edema that involves cyst formation." [DDD:ncarter]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000153989 NUS1 / Q96E22 / NUS1 dehydrodolichyl diphosphate synthase subunit  / complex






 

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