ENSG00000119711


Homo sapiens

Features
Gene ID: ENSG00000119711
  
Biological name :ALDH6A1
  
Synonyms : aldehyde dehydrogenase 6 family member A1 / ALDH6A1 / Q02252
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q24.3
Gene start: 74056850
Gene end: 74084493
  
Corresponding Affymetrix probe sets: 204289_at (Human Genome U133 Plus 2.0 Array)   204290_s_at (Human Genome U133 Plus 2.0 Array)   221588_x_at (Human Genome U133 Plus 2.0 Array)   221589_s_at (Human Genome U133 Plus 2.0 Array)   221590_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452081
Ensembl peptide - ENSP00000342564
Ensembl peptide - ENSP00000450436
NCBI entrez gene - 4329     See in Manteia.
OMIM - 603178
RefSeq - XM_017021331
RefSeq - NM_001278593
RefSeq - NM_001278594
RefSeq - NM_005589
RefSeq Peptide - NP_001265522
RefSeq Peptide - NP_001265523
RefSeq Peptide - NP_005580
swissprot - A0A024R6G4
swissprot - G3V4Z4
swissprot - Q02252
Ensembl - ENSG00000119711
  
Related genetic diseases (OMIM): 614105 - Methylmalonate semialdehyde dehydrogenase deficiency, 614105
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aldh6a1ENSDARG00000053485Danio rerio
 ALDH6A1ENSGALG00000010211Gallus gallus
 Q9EQ20ENSMUSG00000021238Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010061  Methylmalonate-semialdehyde dehydrogenase
 IPR015590  Aldehyde dehydrogenase domain
 IPR016160  Aldehyde dehydrogenase, cysteine active site
 IPR016161  Aldehyde/histidinol dehydrogenase
 IPR016162  Aldehyde dehydrogenase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006210 thymine catabolic process IMP
 biological_processGO:0006573 valine metabolic process ISS
 biological_processGO:0006574 valine catabolic process IMP
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009083 branched-chain amino acid catabolic process TAS
 biological_processGO:0019859 thymine metabolic process ISS
 biological_processGO:0050873 brown fat cell differentiation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000062 fatty-acyl-CoA binding ISS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004491 methylmalonate-semialdehyde dehydrogenase (acylating) activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0018478 malonate-semialdehyde dehydrogenase (acetylating) activity ISS


Pathways (from Reactome)
Pathway description
Branched-chain amino acid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000343 Long philtrum 
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000414 Bulbous nose 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001942 Metabolic acidosis 
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 HP:0001999 Facial dysmorphism 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003812 Phenotypic variability 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0010804 Tented upper lip vermilion "Triangular appearance of the oral aperture with the apex in the midpoint of the upper vermilion and the lower vermilion forming the base." [pmid:19125428]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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