ENSG00000122335


Homo sapiens

Features
Gene ID: ENSG00000122335
  
Biological name :SERAC1
  
Synonyms : Q96JX3 / SERAC1 / serine active site containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q25.3
Gene start: 158109515
Gene end: 158168280
  
Corresponding Affymetrix probe sets: 1569864_at (Human Genome U133 Plus 2.0 Array)   232183_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496451
Ensembl peptide - ENSP00000496731
Ensembl peptide - ENSP00000356068
Ensembl peptide - ENSP00000356071
Ensembl peptide - ENSP00000391168
Ensembl peptide - ENSP00000475523
Ensembl peptide - ENSP00000475808
Ensembl peptide - ENSP00000475855
Ensembl peptide - ENSP00000493554
Ensembl peptide - ENSP00000493559
Ensembl peptide - ENSP00000493723
Ensembl peptide - ENSP00000494205
Ensembl peptide - ENSP00000495367
Ensembl peptide - ENSP00000496087
Ensembl peptide - ENSP00000496113
NCBI entrez gene - 84947     See in Manteia.
OMIM - 614725
RefSeq - NM_032861
RefSeq - XM_006715586
RefSeq - XM_011536196
RefSeq - XM_011536198
RefSeq Peptide - NP_116250
swissprot - U3KQE4
swissprot - U3KQG3
swissprot - Q5JVM6
swissprot - Q96JX3
Ensembl - ENSG00000122335
  
Related genetic diseases (OMIM): 614739 - 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome, 614739
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5SNQ7ENSDARG00000056121Danio rerio
 SERAC1ENSGALG00000013732Gallus gallus
 Q3U213ENSMUSG00000015659Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR029058  Alpha/Beta hydrolase fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0008654 phospholipid biosynthetic process IEA
 biological_processGO:0030198 extracellular matrix organization IDA
 biological_processGO:0032367 intracellular cholesterol transport IMP
 biological_processGO:0036148 phosphatidylglycerol acyl-chain remodeling IMP
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0044233 ER-mitochondrion membrane contact site IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005488 binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001987 Hyperammonemia 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002719 Recurrent infections 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003256 Abnormalities of the clotting factors 
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 HP:0003535 3-Methylglutaconic aciduria 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012444 Brain atrophy "Partial or complete wasting (loss) of brain tissue that was once present." [HPO:probinson]
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 HP:0040187 Neonatal sepsis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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