ENSG00000124092


Homo sapiens

Features
Gene ID: ENSG00000124092
  
Biological name :CTCFL
  
Synonyms : CCCTC-binding factor like / CTCFL / Q8NI51
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.31
Gene start: 57495966
Gene end: 57525652
  
Corresponding Affymetrix probe sets: 1552368_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477488
Ensembl peptide - ENSP00000477165
Ensembl peptide - ENSP00000477412
Ensembl peptide - ENSP00000243914
Ensembl peptide - ENSP00000360239
Ensembl peptide - ENSP00000392034
Ensembl peptide - ENSP00000399061
Ensembl peptide - ENSP00000403369
Ensembl peptide - ENSP00000409344
Ensembl peptide - ENSP00000413713
Ensembl peptide - ENSP00000415329
Ensembl peptide - ENSP00000415579
Ensembl peptide - ENSP00000437999
Ensembl peptide - ENSP00000439998
Ensembl peptide - ENSP00000476398
Ensembl peptide - ENSP00000476458
Ensembl peptide - ENSP00000476577
Ensembl peptide - ENSP00000476718
Ensembl peptide - ENSP00000476783
NCBI entrez gene - 140690     See in Manteia.
OMIM - 607022
RefSeq - NM_001269055
RefSeq - NM_001269040
RefSeq - NM_001269041
RefSeq - NM_001269042
RefSeq - NM_001269043
RefSeq - NM_001269044
RefSeq - NM_001269045
RefSeq - NM_001269046
RefSeq - NM_001269047
RefSeq - NM_001269048
RefSeq - NM_001269049
RefSeq - NM_001269050
RefSeq - NM_001269051
RefSeq - NM_001269052
RefSeq - NM_001269054
RefSeq - NM_080618
RefSeq Peptide - NP_542185
RefSeq Peptide - NP_001255969
RefSeq Peptide - NP_001255970
RefSeq Peptide - NP_001255971
RefSeq Peptide - NP_001255972
RefSeq Peptide - NP_001255973
RefSeq Peptide - NP_001255974
RefSeq Peptide - NP_001255975
RefSeq Peptide - NP_001255976
RefSeq Peptide - NP_001255977
RefSeq Peptide - NP_001255978
RefSeq Peptide - NP_001255979
RefSeq Peptide - NP_001255980
RefSeq Peptide - NP_001255981
RefSeq Peptide - NP_001255983
RefSeq Peptide - NP_001255984
swissprot - F5H2V8
swissprot - Q8NI51
swissprot - V9GY73
swissprot - V9GYX4
swissprot - V9GZ46
Ensembl - ENSG00000124092
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CtcflENSMUSG00000070495Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CTCF / P49711 / CCCTC-binding factorENSG0000010297444
ZFP64 / Q9NPA5 / Q9NTW7 / ZFP64 zinc finger proteinENSG0000002025620
Q9H4Z2 / ZNF335 / zinc finger protein 335ENSG0000019802619


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006349 regulation of gene expression by genetic imprinting ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0016571 histone methylation ISS
 biological_processGO:0043046 DNA methylation involved in gamete generation ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0051569 regulation of histone H3-K4 methylation IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042393 histone binding ISS
 molecular_functionGO:0043565 sequence-specific DNA binding ISS
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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