ENSG00000127463


Homo sapiens

Features
Gene ID: ENSG00000127463
  
Biological name :EMC1
  
Synonyms : EMC1 / ER membrane protein complex subunit 1 / Q8N766
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.13
Gene start: 19215664
Gene end: 19251552
  
Corresponding Affymetrix probe sets: 1556186_s_at (Human Genome U133 Plus 2.0 Array)   212394_at (Human Genome U133 Plus 2.0 Array)   212395_s_at (Human Genome U133 Plus 2.0 Array)   212396_s_at (Human Genome U133 Plus 2.0 Array)   215991_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420608
Ensembl peptide - ENSP00000419345
Ensembl peptide - ENSP00000492918
Ensembl peptide - ENSP00000364345
Ensembl peptide - ENSP00000364354
Ensembl peptide - ENSP00000417070
Ensembl peptide - ENSP00000418481
NCBI entrez gene - 23065     See in Manteia.
OMIM - 616846
RefSeq - XM_005245788
RefSeq - NM_001271427
RefSeq - NM_001271428
RefSeq - NM_001271429
RefSeq - NM_015047
RefSeq - XM_005245787
RefSeq Peptide - NP_001258357
RefSeq Peptide - NP_055862
RefSeq Peptide - NP_001258358
RefSeq Peptide - NP_001258356
swissprot - A0A286YEW0
swissprot - Q8N766
swissprot - H7C4E3
swissprot - H7C5A2
swissprot - Q5TG59
Ensembl - ENSG00000127463
  
Related genetic diseases (OMIM): 616875 - Cerebellar atrophy, visual impairment, and psychomotor retardation, 616875
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 emc1ENSDARG00000057255Danio rerio
 EMC1ENSGALG00000003969Gallus gallus
 Emc1ENSMUSG00000078517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002372  Pyrrolo-quinoline quinone repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR011678  ER membrane protein complex subunit 1, C-terminal
 IPR026895  ER membrane protein complex subunit 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034975 protein folding in endoplasmic reticulum IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0072546 ER membrane protein complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000188 Short upper lip 
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 HP:0000212 Gingival hyperplasia 
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 HP:0000278 Retrognathia 
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 HP:0000294 Low frontal hairline "A condition in which the scalp hair is present at lower than usual areas of the forehead." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000322 Short philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000483 Astigmatism 
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 HP:0000490 Deep set eyes 
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000540 Hypermetropia 
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 HP:0000545 Myopia 
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 HP:0000565 Esotropia 
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 HP:0000648 Optic atrophy 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000750 Impaired language development 
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 HP:0001212 Prominent fingertip pads "A soft tissue prominence of the ventral aspects of the fingertips. The term "persistent fetal fingertip pads" is often used as a synonym, but should better not be used because it implies knowledge of history of the patient which often does not exist." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002509 Limb hypertonia 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0007371 Atrophy/Degeneration of the corpus callosum "The presence of atrophy (wasting) of the corpus callosum." [HPO:sdoelken]
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 HP:0008755 Laryngotracheomalacia 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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