ENSG00000129255


Homo sapiens

Features
Gene ID: ENSG00000129255
  
Biological name :MPDU1
  
Synonyms : mannose-P-dolichol utilization defect 1 / MPDU1 / O75352
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.1
Gene start: 7583529
Gene end: 7592789
  
Corresponding Affymetrix probe sets: 1557569_at (Human Genome U133 Plus 2.0 Array)   209208_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000459498
Ensembl peptide - ENSP00000250124
Ensembl peptide - ENSP00000352876
Ensembl peptide - ENSP00000379758
Ensembl peptide - ENSP00000414071
Ensembl peptide - ENSP00000458741
Ensembl peptide - ENSP00000459306
Ensembl peptide - ENSP00000459409
Ensembl peptide - ENSP00000460864
Ensembl peptide - ENSP00000461183
Ensembl peptide - ENSP00000461499
Ensembl peptide - ENSP00000462229
Ensembl peptide - ENSP00000462500
Ensembl peptide - ENSP00000462839
Ensembl peptide - ENSP00000463037
Ensembl peptide - ENSP00000463056
Ensembl peptide - ENSP00000463966
Ensembl peptide - ENSP00000464158
Ensembl peptide - ENSP00000464524
NCBI entrez gene - 9526     See in Manteia.
OMIM - 604041
RefSeq - XM_011524081
RefSeq - XM_006721598
RefSeq - XM_006721599
RefSeq - NM_004870
RefSeq - XM_006721597
RefSeq Peptide - NP_001317002
RefSeq Peptide - NP_004861
swissprot - I3L4E0
swissprot - I3L4T1
swissprot - J3KSI4
swissprot - J3KT75
swissprot - J3KTK8
swissprot - J3QQZ4
swissprot - I3L1D2
swissprot - J3QRD5
swissprot - J3QS48
swissprot - J3QW43
swissprot - O75352
swissprot - I3L295
swissprot - A0A0S2Z4W8
swissprot - I3L261
swissprot - I3L405
Ensembl - ENSG00000129255
  
Related genetic diseases (OMIM): 609180 - Congenital disorder of glycosylation, type If, 609180
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mpdu1aENSDARG00000035562Danio rerio
 mpdu1bENSDARG00000040265Danio rerio
 Mpdu1ENSMUSG00000018761Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006603  PQ-loop repeat
 IPR016817  Mannose-P-dolichol utilization defect 1 protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding NAS
 biological_processGO:0006488 dolichol-linked oligosaccharide biosynthetic process TAS
 biological_processGO:0009312 oligosaccharide biosynthetic process IGI
 cellular_componentGO:0005789 endoplasmic reticulum membrane NAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective MPDU1 causes MPDU1-CDG (CDG-1f)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000958 Dry skin 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001371 Contractures 
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 HP:0001508 Failure to thrive 
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 HP:0002059 Cerebral atrophy 
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 HP:0003256 Abnormalities of the clotting factors 
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 HP:0003577 Onset at birth 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0040189 Scaling skin "Refers to the loss of the outer layer of the epidermis in large, scale-like flakes." []
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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